BMRB: 10006

SOLUTION STRUCTURE OF FIBRONECTIN TYPE III DOMAIN OF MOUSE HYPOTHETICAL PROTEIN

Authors

Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S.

Assembly

FN3 domain of HYPOTHETICAL PROTEIN

Entity

1. FN3 domain of HYPOTHETICAL PROTEIN (polymer, Thiol state: all free), 120 monomers, 13468.90 Da Detail

GSSGSSGMEP HKVVPLSKPH PPVVGKVTHH SIELYWDLEQ KEKRQGPQEQ WLRFSIEEED PKMHSYGVIY TGYATRHVVE GLEPRTLYKF RLKVTSPSGE YEYSPVVSVA TTRESGPSSG

Formula weight

13468.9 Da

Source organism

Mus musculus

Exptl. method

NMR

Refine. method

torsion angle dynamics

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 91.7 %, Completeness: 92.7 %, Completeness (bb): 90.4 % Detail

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Polymer type: polypeptide(L)

	Total	1H	13C	15N
All	92.7 % (1292 of 1394)	92.2 % (673 of 730)	93.6 % (514 of 549)	91.3 % (105 of 115)
Backbone	90.4 % (631 of 698)	89.2 % (214 of 240)	91.1 % (318 of 349)	90.8 % (99 of 109)
Sidechain	94.9 % (764 of 805)	93.7 % (459 of 490)	96.8 % (299 of 309)	100.0 % (6 of 6)
Aromatic	96.8 % (120 of 124)	96.8 % (60 of 62)	96.7 % (58 of 60)	100.0 % (2 of 2)
Methyl	100.0 % (106 of 106)	100.0 % (53 of 53)	100.0 % (53 of 53)

1. FN3 domain

GSSGSSGMEP HKVVPLSKPH PPVVGKVTHH SIELYWDLEQ KEKRQGPQEQ WLRFSIEEED PKMHSYGVIY TGYATRHVVE GLEPRTLYKF RLKVTSPSGE YEYSPVVSVA TTRESGPSSG

Show sample condition

Sample

Pressure 1 (±0.03) atm, Temperature 296 (±0.1) K, pH 7.5 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	FN3 domain	[U-13C; U-15N]	protein	1.1 mM
2	d-Tris HCl		buffer	20 mM
3	NaCl		salt	100 mM
4	d-DTT		salt	1 mM
5	NaN3		salt	0.02 %
6	D2O		solvent	10 %
7	H2O		solvent	90 %

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LACS Plot; CA

Referencing offset: -0.04 ppm, Outliers: 3 Detail

Show chemical shift referencing parameters

Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	internal	direct	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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LACS Plot; CB

Referencing offset: -0.04 ppm, Outliers: 3 Detail

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Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	internal	direct	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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LACS Plot; HA

Referencing offset: 0.03 ppm, Outliers: 1 Detail

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Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	internal	direct	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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LACS Plot; CO

Referencing offset: 0.47 ppm, Outliers: 4 Detail

Show chemical shift referencing parameters

Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	internal	direct	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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Protein Blocks Logo

Calculated from 20 models in PDB: 1WFU, Strand ID: A Detail

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Release date

2006-10-22

Citation

Solution structure of fibronectin type III domain of mouse hypothetical protein
Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S.

Related entities 1. FN3 domain of HYPOTHETICAL PROTEIN, : 1 : 2 : 82 entities Detail

Experiments performed 2 experiments Detail