BMRB: 10099

Solution Structure of the First Fibronectin Type III domain of human KIAA1568 Protein

Authors

Li, H., Kigawa, T., Tochio, N., Koshiba, S., Inoue, M., Yokoyama, S.

Assembly

KIAA1568 Protein

Entity

1. KIAA1568 Protein (polymer, Thiol state: all free), 117 monomers, 12352.55 Da Detail

GSSGSSGKNY DLSDLPGPPS KPQVTDVTKN SVTLSWQPGT PGTLPASAYI IEAFSQSVSN SWQTVANHVK TTLYTVRGLR PNTIYLFMVR AINPQGLSDP SPMSDPVRTQ DSGPSSG

Formula weight

12352.55 Da

Source organism

Homo sapiens

Exptl. method

NMR

Refine. method

torsion angle dynamics, restrained molecular dynamics

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 99.1 %, Completeness: 96.0 %, Completeness (bb): 93.2 % Detail

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Polymer type: polypeptide(L)

	Total	1H	13C	15N
All	96.0 % (1232 of 1284)	97.9 % (651 of 665)	92.8 % (465 of 501)	98.3 % (116 of 118)
Backbone	93.2 % (630 of 676)	96.5 % (223 of 231)	89.4 % (305 of 341)	98.1 % (102 of 104)
Sidechain	99.2 % (709 of 715)	98.6 % (428 of 434)	100.0 % (267 of 267)	100.0 % (14 of 14)
Aromatic	97.5 % (78 of 80)	95.0 % (38 of 40)	100.0 % (38 of 38)	100.0 % (2 of 2)
Methyl	100.0 % (116 of 116)	100.0 % (58 of 58)	100.0 % (58 of 58)

1. Fibronectin Type III domain

GSSGSSGKNY DLSDLPGPPS KPQVTDVTKN SVTLSWQPGT PGTLPASAYI IEAFSQSVSN SWQTVANHVK TTLYTVRGLR PNTIYLFMVR AINPQGLSDP SPMSDPVRTQ DSGPSSG

Show sample condition

Sample

Pressure 1 (±0.001) atm, Temperature 298 (±0.1) K, pH 6.0 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	fibronectin type III domain	[U-13C; U-15N]		1.1 mM
2	phosphate		buffer	20 mM
3	NaCl		salt	100 mM
4	NaN3			0.02 %
5	H2O		solvent	90 %
6	D2O		solvent	10 %

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LACS Plot; CA

Referencing offset: -0.17 ppm, Outliers: 1 Detail

Show chemical shift referencing parameters

Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	null	indirect	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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LACS Plot; CB

Referencing offset: -0.17 ppm, Outliers: 1 Detail

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Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	null	indirect	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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LACS Plot; HA

Referencing offset: -0.02 ppm, Outliers: 1 Detail

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Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	null	indirect	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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LACS Plot; CO

Referencing offset: 0.54 ppm, Outliers: 1 Detail

Show chemical shift referencing parameters

Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	null	indirect	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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Protein Blocks Logo

Calculated from 20 models in PDB: 1UEM, Strand ID: A Detail

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Release date

2008-08-14

Citation

Solution Structure of the First Fibronectin Type III domain of human KIAA1568 Protein
Li, H., Kigawa, T., Tochio, N., Koshiba, S., Inoue, M., Yokoyama, S.

Related entities 1. KIAA1568 Protein, : 1 : 549 entities Detail

Interaction partners 1. KIAA1568 Protein, : 25 interactors Detail

Experiments performed 2 experiments Detail