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Solution structure of the 4.1R FERM alpha lobe domain
Authors
Kusunoki, H., Kohno, T.
Assembly
4.1R FERM alpha-lobe domain
Entity
1. 4.1R FERM alpha-lobe domain (polymer, Thiol state: all free), 109 monomers, 12406.93 Da Detail

GSHMDPAQLT EDITRYYLCL QLRQDIVAGR LPCSFATLAL LGSYTIQSEL GDYDPELHGV DYVSDFKLAP NQTKELEEKV MELHKSYRSM TPAQADLEFL ENAKKLSMY


Formula weight
12406.93 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 98.1 %, Completeness (bb): 99.1 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All98.1 % (1251 of 1275)98.2 % (650 of 662)98.0 % (491 of 501)98.2 % (110 of 112)
Backbone99.1 % (638 of 644)99.1 % (216 of 218)99.4 % (320 of 322)98.1 % (102 of 104)
Sidechain97.6 % (717 of 735)97.7 % (434 of 444)97.2 % (275 of 283)100.0 % (8 of 8)
Aromatic91.8 % (90 of 98)91.8 % (45 of 49)91.8 % (45 of 49)
Methyl100.0 % (120 of 120)100.0 % (60 of 60)100.0 % (60 of 60)

1. 4.1R FERM alpha-lobe domain

GSHMDPAQLT EDITRYYLCL QLRQDIVAGR LPCSFATLAL LGSYTIQSEL GDYDPELHGV DYVSDFKLAP NQTKELEEKV MELHKSYRSM TPAQADLEFL ENAKKLSMY

Sample #1

Solvent system 100% D2O, Pressure 1 atm, Temperature 298 K, pH 6.4


#NameIsotope labelingTypeConcentration
14.1R FERM alpha-lobe domainnatural abundanceprotein0.12 ~ 0.8 mM
2NaClsalt45 mM
3D2Osolvent100 %
Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.4


#NameIsotope labelingTypeConcentration
44.1R FERM alpha-lobe domain[U-98% 15N]protein0.12 ~ 0.8 mM
5NaClsalt45 mM
6H2Osolvent90 %
7D2Osolvent10 %
Sample #3

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.4


#NameIsotope labelingTypeConcentration
84.1R FERM alpha-lobe domain[U-98% 13C; U-98% 15N]protein0.12 ~ 0.8 mM
9NaClsalt45 mM
10H2Osolvent90 %
11D2Osolvent10 %
Sample #4

Solvent system 100% D2O, Pressure 1 atm, Temperature 298 K, pH 6.4


#NameIsotope labelingTypeConcentration
124.1R FERM alpha-lobe domain[U-98% 13C; U-98% 15N]protein0.12 ~ 0.8 mM
13NaClsalt45 mM
14D2Osolvent100 %
Sample #5

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.4


#NameIsotope labelingTypeConcentration
154.1R FERM alpha-lobe domain[U-10% 13C; U-98% 15N]protein0.48 mM
16NaClsalt45 mM
17H2Osolvent90 %
18D2Osolvent10 %

LACS Plot; CA
Referencing offset: -0.3 ppm, Outliers: 2 Detail
LACS Plot; CB
Referencing offset: -0.3 ppm, Outliers: 2 Detail
LACS Plot; HA
Referencing offset: 0.08 ppm, Outliers: 2 Detail
LACS Plot; CO
Referencing offset: -0.34 ppm, Outliers: 3 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2RQ1, Strand ID: A Detail


Release date
2009-04-22
Citation
Solution structure and glycophorin C binding studies of the protein 4.1R FERM alpha-lobe domain
Kusunoki, H., Kohno, T.
Proteins (2009), 76, 255-260, PubMed 19338061 , DOI 10.1002/prot.22405 ,
Related entities 1. 4.1R FERM alpha-lobe domain, : 1 : 4 : 219 entities Detail
Interaction partners 1. 4.1R FERM alpha-lobe domain, : 110 interactors Detail
Experiments performed 21 experiments Detail
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