BMRB: 11179

Solution structure of the SH3 domain of SH3-domain kinase binding protein 1

Authors

Inoue, K., Hayashi, F., Yokoyama, S.

Assembly

SH3-domain kinase binding protein 1

Entity

1. SH3-domain kinase binding protein 1 (polymer, Thiol state: all free), 68 monomers, 7277.934 Da Detail

GSSGSSGRRC QVAFSYLPQN DDELELKVGD IIEVVGEVEE GWWEGVLNGK TGMFPSNFIK ELSGPSSG

Formula weight

7277.934 Da

Source organism

Mus musculus

Exptl. method

solution NMR

Refine. method

torsion angle dynamics

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 99.5 %, Completeness (bb): 99.0 % Detail

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Polymer type: polypeptide(L)

	Total	1H	13C	15N
All	99.5 % (749 of 753)	99.2 % (388 of 391)	100.0 % (290 of 290)	98.6 % (71 of 72)
Backbone	99.0 % (398 of 402)	97.9 % (141 of 144)	100.0 % (193 of 193)	98.5 % (64 of 65)
Sidechain	100.0 % (408 of 408)	100.0 % (247 of 247)	100.0 % (154 of 154)	100.0 % (7 of 7)
Aromatic	100.0 % (62 of 62)	100.0 % (31 of 31)	100.0 % (29 of 29)	100.0 % (2 of 2)
Methyl	100.0 % (60 of 60)	100.0 % (30 of 30)	100.0 % (30 of 30)

1. SH3 domain

GSSGSSGRRC QVAFSYLPQN DDELELKVGD IIEVVGEVEE GWWEGVLNGK TGMFPSNFIK ELSGPSSG

Show sample condition

Sample

Solvent system 90% {H2O;} 10% D2O, Pressure 1 (±0.001) atm, Temperature 298 (±0.1) K, pH 6.0 (±0.05), Details 0.61mM 13C, 15N-labeled {protein;} 20mM {PiNa;} 100mM {NaCl;} 1mM {d-DTT;} 0.02% NaN3

#	Name	Isotope labeling	Type	Concentration
1	SH3 domain	[U-13C; U-15N]	protein	0.61 mM
2	PiNa	natural abundance	buffer	20 mM
3	NaCl	natural abundance	salt	100 mM
4	d-DTT	natural abundance	salt	1 mM
5	NaN3	natural abundance	salt	0.02 %
6	H2O		solvent	90 %
7	D2O		solvent	10 %

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LACS Plot; CA

Referencing offset: -0.13 ppm, Outliers: 2 Detail

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Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	null	indirect	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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LACS Plot; CB

Referencing offset: -0.13 ppm, Outliers: 2 Detail

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Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	null	indirect	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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LACS Plot; HA

Referencing offset: -0.06 ppm, Outliers: 1 Detail

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Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	null	indirect	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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LACS Plot; CO

Referencing offset: 0.47 ppm, Outliers: 1 Detail

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Chemical shift reference

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
13C	DSS	methyl protons	0.0 ppm	null	indirect	0.2514495
1H	DSS	methyl protons	0.0 ppm	null	indirect	1.0
15N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

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Protein Blocks Logo

Calculated from 20 models in PDB: 1WI7, Strand ID: A Detail

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Release date

2011-07-19

Citation

Solution structure of the SH3 domain of SH3-domain kinase binding protein 1
Inoue, K., Hayashi, F., Yokoyama, S.

Related entities 1. SH3-domain kinase binding protein 1, : 1 : 8 : 190 entities Detail

Interaction partners 1. SH3-domain kinase binding protein 1, : 17 interactors Detail

Experiments performed 2 experiments Detail