BMRB: 11439

NMR Structure of LC4 transmembrane segment of CCR5

Authors

Miyamoto, K.

Assembly

LC4 transmembrane segment of CCR5

Entity

1. LC4 transmembrane segment of CCR5 (polymer, Thiol state: not present), 18 monomers, 1963.279 Da Detail

VFASLPGIIF TRSQKEGL

Formula weight

1963.279 Da

Source organism

Homo sapiens

Exptl. method

solution NMR

Refine. method

torsion angle dynamics

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 94.4 %, Completeness: 23.2 %, Completeness (bb): 54.1 % Detail

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Polymer type: polypeptide(L)

	Total	1H
All	23.2 % (26 of 112)	23.2 % (26 of 112)
Backbone	54.1 % (20 of 37)	54.1 % (20 of 37)
Sidechain	8.0 % (6 of 75)	8.0 % (6 of 75)
Aromatic	0.0 % (0 of 10)	0.0 % (0 of 10)
Methyl	0.0 % (0 of 12)	0.0 % (0 of 12)

1. LC4

VFASLPGIIF TRSQKEGL

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Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 293 K, pH 4.5

#	Name	Isotope labeling	Type	Concentration
1	LC4	natural abundance	protein	2 mM
2	phosphate	natural abundance	buffer	80 mM
3	sodium dodecyl-d25 sulfate (SDS)	natural abundance	salt	200 mM
4	H2O	natural abundance	solvent	90 %
5	D2O	natural abundance	solvent	10 %

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Calculated from 20 models in PDB: 2RRS, Strand ID: A Detail

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Release date

2013-03-19

Citation

Solution structure of LC4 transmembrane segment of CCR5
Miyamoto, K., Togiya, K.
PLoS One (2011), 6, e20452-e20452, PubMed 21647380 , DOI 10.1371/journal.pone.0020452 , Abstract

Related entities 1. LC4 transmembrane segment of CCR5, : 1 : 8 : 19 : 9 : 19 entities Detail

Interaction partners 1. LC4 transmembrane segment of CCR5, : 15 interactors Detail

Experiments performed 3 experiments Detail