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Tachyplesin I in water
Authors
Kushibiki, T., Kamiya, M., Aizawa, T., Kumaki, Y., Kikukawa, T., Mizuguchi, M., Demura, M., Kawabata, S., Kawano, K.
Assembly
PROTEIN
Entity
1. PROTEIN (polymer, Thiol state: all disulfide bound), 18 monomers, 2266.766 Da Detail

KWCFRVCYRG ICYRRCRX


Formula weight
2266.766 Da
Entity Connection
disulfide 2 Detail

IDTypeValue orderAtom ID 1Atom ID 2
1disulfidesing1:CYS3:SG1:CYS16:SG
2disulfidesing1:CYS7:SG1:CYS12:SG

Source organism
Tachypleus tridentatus
Exptl. method
solution NMR
Refine. method
DGSA-distance geometry simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 94.4 %, Completeness: 85.1 %, Completeness (bb): 97.1 % Detail

Polymer type: polypeptide(L)

Total1H
All85.1 % (103 of 121)85.1 % (103 of 121)
Backbone97.1 % (34 of 35)97.1 % (34 of 35)
Sidechain80.2 % (69 of 86)80.2 % (69 of 86)
Aromatic78.9 % (15 of 19)78.9 % (15 of 19)
Methyl100.0 % (4 of 4)100.0 % (4 of 4)

1. Tachyplesin I

KWCFRVCYRG ICYRRCRX

Sample

Solvent system 90% H2O/10% D2O, Temperature 308 K, pH 3.8


#NameIsotope labelingTypeConcentration
1Tachyplesin Inatural abundanceprotein1 mM
2H2Onatural abundancesolvent90 %
3D2Onatural abundancesolvent10 %

Protein Blocks Logo
Calculated from 20 models in PDB: 2RTV, Strand ID: A Detail


Release date
2014-02-13
Citation
Interaction between tachyplesin I, an antimicrobial peptide derived from horseshoe crab, and lipopolysaccharide
Kushibiki, T., Kamiya, M., Aizawa, T., Kumaki, Y., Kikukawa, T., Mizuguchi, M., Demura, M., Kawabata, S., Kawano, K.
Biochim. Biophys. Acta (2014), 1844, 527-534, PubMed 24389234 , DOI 10.1016/j.bbapap.2013.12.017 ,
Related entities 1. PROTEIN, : 1 : 8 : 11 entities Detail
Experiments performed 4 experiments Detail
NMR combined restraints 3 contents Detail