BMRB: 15040

DPC micelle-bound NMR structures of Tritrp2

Authors

Schibli, D.J., Nguyen, L.T.

Assembly

13-mer analogue of Prophenin-1 containing WWW

Entity

1. 13-mer analogue of Prophenin-1 containing WWW (polymer, Thiol state: not present), 14 monomers, 1788.205 Da Detail

VKKFPWWWPF LKKX

Formula weight

1788.205 Da

Exptl. method

solution NMR

Refine. method

simulated annealing

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 92.9 %, Completeness: 83.3 %, Completeness (bb): 95.8 % Detail

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Polymer type: polypeptide(L)

	Total	1H
All	83.3 % (95 of 114)	83.3 % (95 of 114)
Backbone	95.8 % (23 of 24)	95.8 % (23 of 24)
Sidechain	80.0 % (72 of 90)	80.0 % (72 of 90)
Aromatic	85.7 % (24 of 28)	85.7 % (24 of 28)
Methyl	50.0 % (2 of 4)	50.0 % (2 of 4)

1. 13-mer analogue of Prophenin-1 containing WWW

VKKFPWWWPF LKKX

Show sample condition

Sample

Solvent system 90% H2O, 10% D2O, Temperature 310 K, pH 4.6, Details 90% H2O, 10% D2O, 150 mM DPC-d38

#	Name	Isotope labeling	Type	Concentration
1	Tritrp2	natural abundance		1.0 ~ 2.0 mM
2	DPC-d38			150 mM
3	H2O			90 %
4	D2O			10 %

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Protein Blocks Logo

Calculated from 20 models in PDB: 2I1E, Strand ID: A Detail

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Release date

2006-12-17

Citation

Structure-function analysis of tritrpticin analogs: potential relationships between antimicrobial activities, model membrane interactions, and their micelle-bound NMR structures
Schibli, D.J., Nguyen, L.T., Kernaghan, S.D., Rekdal, O., Vogel, H.J.
Biophys. J. (2006), 91, 4413-4426, PubMed 16997878 , DOI 10.1529/biophysj.106.085837 , Abstract

Entries sharing articles BMRB: 5, Swiss-Prot: 1 entries Detail

Related entities 1. 13-mer analogue of Prophenin-1 containing WWW, : 1 : 6 entities Detail

Experiments performed 3 experiments Detail