BMRB: 15041

DPC micelle-bound NMR structures of Tritrp3

Authors

Schibli, D.J., Nguyen, L.T.

Assembly

13-mer analogue of Prophenin-1 containing WWW

Entity

1. 13-mer analogue of Prophenin-1 containing WWW (polymer, Thiol state: not present), 14 monomers, 1848.187 Da Detail

VRRFAWWWAF LRRX

Formula weight

1848.187 Da

Exptl. method

solution NMR

Refine. method

simulated annealing

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 92.9 %, Completeness: 85.3 %, Completeness (bb): 92.3 % Detail

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Polymer type: polypeptide(L)

	Total	1H
All	85.3 % (87 of 102)	85.3 % (87 of 102)
Backbone	92.3 % (24 of 26)	92.3 % (24 of 26)
Sidechain	82.9 % (63 of 76)	82.9 % (63 of 76)
Aromatic	89.3 % (25 of 28)	89.3 % (25 of 28)
Methyl	66.7 % (4 of 6)	66.7 % (4 of 6)

1. 13-mer analogue of Prophenin-1 containing WWW

VRRFAWWWAF LRRX

Show sample condition

Sample

Solvent system 90% H2O, 10% D2O, Temperature 310 K, pH 4.7, Details 90% H2O, 10% D2O, 132 mM DPC-d38

#	Name	Isotope labeling	Type	Concentration
1	Tritrp3	natural abundance		1.0 ~ 2.0 mM
2	DPC-d38			132 mM
3	H2O			90 %
4	D2O			10 %

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Protein Blocks Logo

Calculated from 20 models in PDB: 2I1F, Strand ID: A Detail

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Release date

2007-10-29

Citation

Structure-function analysis of tritrpticin analogs: potential relationships between antimicrobial activities, model membrane interactions, and their micelle-bound NMR structures
Schibli, D.J., Nguyen, L.T., Kernaghan, S.D., Rekdal, O., Vogel, H.J.
Biophys. J. (2006), 91, 4413-4426, PubMed 16997878 , DOI 10.1529/biophysj.106.085837 , Abstract

Related entities 1. 13-mer analogue of Prophenin-1 containing WWW, : 1 : 2 : 4 entities Detail

Experiments performed 3 experiments Detail