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NMR Structure of E. Coli YehR Protein. Northeast Structural Genomics Target ER538.
Authors
Ding, K., Ramelot, T.A., Cort, J.R., Chen, C.X., Jiang, M., Cunningham, K., Ma, L., Xiao, R., Liu, J., Baran, M.C., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Kennedy, M.A.
Assembly
YehR
Entity
1. YehR (polymer, Thiol state: not present), 139 monomers, 15363.25 Da Detail

MGDKEESKKF SANLNGTEIA ITYVYKGDKV LKQSSETKIQ FASIGATTKE DAAKTLEPLS AKYKNIAGVE EKLTYTDTYA QENVTIDMEK VDFKALQGIS GINVSAEDAK KGITMAQMEL VMKAAGFKEV KLEHHHHHH


Formula weight
15363.25 Da
Source organism
Escherichia coli
Exptl. method
solution NMR
Refine. method
DGSA-distance geometry simulated annealing
Data set
assigned_chemical_shifts, spectral_peak_list
Chem. Shift Complete
Sequence coverage: 99.3 %, Completeness: 97.1 %, Completeness (bb): 97.4 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All97.1 % (1560 of 1607)97.1 % (809 of 833)96.5 % (604 of 626)99.3 % (147 of 148)
Backbone97.4 % (810 of 832)97.2 % (278 of 286)97.1 % (396 of 408)98.6 % (136 of 138)
Sidechain96.2 % (871 of 905)96.5 % (528 of 547)95.7 % (333 of 348)100.0 % (10 of 10)
Aromatic80.8 % (84 of 104)82.7 % (43 of 52)78.8 % (41 of 52)
Methyl98.7 % (150 of 152)98.7 % (75 of 76)98.7 % (75 of 76)

1. YehR

MGDKEESKKF SANLNGTEIA ITYVYKGDKV LKQSSETKIQ FASIGATTKE DAAKTLEPLS AKYKNIAGVE EKLTYTDTYA QENVTIDMEK VDFKALQGIS GINVSAEDAK KGITMAQMEL VMKAAGFKEV KLEHHHHHH

Sample #1

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 283 (±1) K, pH 5.5 (±0.2)


#NameIsotope labelingTypeConcentration
1protein[U-100% 13C; U-100% 15N]1 (±0.2) mM
2NH4OAcnatural abundance20 (±1.0) mM
3NaClnatural abundance100 (±5.0) mM
4DTTnatural abundance10 (±1.0) mM
5CaCl2natural abundance5 (±1.0) mM
6NaN3natural abundance0.02 (±0.001) %
7H2O95 (±0.001) %
8D2O5 (±0.001) %
Sample #2

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 283 (±1) K, pH 5.5 (±0.2)


#NameIsotope labelingTypeConcentration
9protein[U-5% 13C; U-100% 15N]1 (±0.2) mM
10NH4OAcnatural abundance20 (±1.0) mM
11NaClnatural abundance100 (±5.0) mM
12DTTnatural abundance10 (±1.0) mM
13CaCl2natural abundance5 (±1.0) mM
14NaN3natural abundance0.02 (±0.001) %
15H2O95 (±0.001) %
16D2O5 (±0.001) %
Sample #3

Solvent system 100% D2O, Pressure 1 atm, Temperature 283 (±1) K, pH 5.5 (±0.2)


#NameIsotope labelingTypeConcentration
17protein[U-100% 13C; U-100% 15N]1 (±0.2) mM
18NH4OAcnatural abundance20 (±1.0) mM
19NaClnatural abundance100 (±5.0) mM
20DTTnatural abundance10 (±1.0) mM
21CaCl2natural abundance5 (±1.0) mM
22NaN3natural abundance0.02 (±0.001) %
23D2O100 (±0.001) %

LACS Plot; CA
Referencing offset: -0.17 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.17 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.09 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: -0.02 ppm, Outliers: 3 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2JOE, Strand ID: A Detail


Release date
2007-04-10
Citation
NMR Structure of E. Coli YehR Protein
Ding, K., Ramelot, T.A., Cort, J.R., Jiang, M., Xiao, R., Swapna, G.V.T., Montelione, G.T., Kennedy, M.A.
Related entities 1. YehR, : 1 : 2 : 3 entities Detail
Interaction partners 1. YehR, : 6 interactors Detail
Experiments performed 21 experiments Detail
NMR combined restraints 5 contents Detail
Keywords alpha + beta sandwich, six antiparallel beta strands