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Solution Structure of the C2 domain of human Smurf2
Authors
Wiesner, S., Ogunjimi, A.A., Wang, H., Rotin, D., Sicheri, F., Wrana, J.L., Forman-Kay, J.D.
Assembly
C2 domain of Smurf2
Entity
1. C2 domain of Smurf2 (polymer, Thiol state: all free), 131 monomers, 14676.73 Da Detail

GPVKLRLTVL CAKNLVKKDF FRLPDPFAKV VVDGSGQCHS TDTVKNTLDP KWNQHYDLYI GKSDSVTISV WNHKKIHKKQ GAGFLGCVRL LSNAINRLKD TGYQRLDLCK LGPNDNDTVR GQIVVSLQSR D


Formula weight
14676.73 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
simulated annealing, torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 85.3 %, Completeness (bb): 84.4 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All85.3 % (1322 of 1549)89.9 % (727 of 809)76.1 % (455 of 598)98.6 % (140 of 142)
Backbone84.4 % (655 of 776)97.4 % (260 of 267)70.5 % (270 of 383)99.2 % (125 of 126)
Sidechain88.1 % (788 of 894)86.3 % (468 of 542)90.8 % (305 of 336)93.8 % (15 of 16)
Aromatic73.1 % (76 of 104)88.5 % (46 of 52)56.0 % (28 of 50)100.0 % (2 of 2)
Methyl95.5 % (147 of 154)94.8 % (73 of 77)96.1 % (74 of 77)

1. C2 domain of Smurf2

GPVKLRLTVL CAKNLVKKDF FRLPDPFAKV VVDGSGQCHS TDTVKNTLDP KWNQHYDLYI GKSDSVTISV WNHKKIHKKQ GAGFLGCVRL LSNAINRLKD TGYQRLDLCK LGPNDNDTVR GQIVVSLQSR D

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.2, Details 0.8 mM C2 domain


#NameIsotope labelingTypeConcentration
1HEPESnatural abundance20 mM
2sodium chloridenatural abundance200 mM
3DTTnatural abundance3 mM
4sodium azidenatural abundance0.03 %
Sample #2

Solvent system 100% D2O, Pressure 1 atm, Temperature 298 K, pH 7.2, Details C2 domain 13C, 15N


#NameIsotope labelingTypeConcentration
5hepes[U-13C; U-15N]20 mM
6sodium chloridenatural abundance200 mM
7DTTnatural abundance3 mM
8sodium azidenatural abundance0.03 %

LACS Plot; CA
Referencing offset: -0.34 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.34 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.08 ppm, Outliers: 3 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2JQZ, Strand ID: A Detail


Release date
2008-02-27
Citation
Autoinhibition of the HECT-type ubiquitin ligase Smurf2 through its C2 domain
Wiesner, S., Ogunjimi, A.A., Wang, H., Rotin, D., Sicheri, F., Wrana, J.L., Forman-Kay, J.D.
Cell (2007), 130, 651-662, PubMed 17719543 , DOI 10.1016/j.cell.2007.06.050 ,
Related entities 1. C2 domain of Smurf2, : 1 : 4 : 77 entities Detail
Interaction partners 1. C2 domain of Smurf2, : 76 interactors Detail
Experiments performed 10 experiments Detail
nullKeywords C2 domain, Phospholipid binding, Smurf2, Ubiquitin protein ligase