BMRB: 15359

Solution structure of arenicin-1

Authors

Jakovkin, I.B., Hecht, O., Gelhaus, C., Krasnosdembskaya, A.D., Fedders, H., Leippe, M., Groetzinger, J.

Assembly

arenicin monomer

Entity

1. arenicin monomer (polymer, Thiol state: all disulfide bound), 21 monomers, 2760.297 Da Detail

RWCVYAYVRV RGVLVRYRRC W

Formula weight

2760.297 Da

Entity Connection

disulfide 1 Detail

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ID	Type	Value order	Atom ID 1	Atom ID 2
1	disulfide	sing	1:CYS3:SG	1:CYS20:SG

Source organism

Arenicola marina

Exptl. method

solution NMR

Refine. method

simulated annealing

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 85.4 %, Completeness (bb): 97.7 % Detail

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Polymer type: polypeptide(L)

	Total	1H
All	85.4 % (123 of 144)	85.4 % (123 of 144)
Backbone	97.7 % (42 of 43)	97.7 % (42 of 43)
Sidechain	80.2 % (81 of 101)	80.2 % (81 of 101)
Aromatic	70.8 % (17 of 24)	70.8 % (17 of 24)
Methyl	84.6 % (11 of 13)	84.6 % (11 of 13)

1. arenicin monomer

RWCVYAYVRV RGVLVRYRRC W

Show sample condition

Sample

Pressure 1 atm, Temperature 283 K, pH 3.5

#	Name	Isotope labeling	Type	Concentration
1	entity	natural abundance		1.8 mg
2	acetic acid	[U-2H]		2 %

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Calculated from 1 models in PDB: 2JSB, Strand ID: A Detail

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Release date

2008-06-24

Citation

Structure and mode of action of the antimicrobial peptide arenicin
Andra, J., Jakovkin, I.B., Groetzinger, J., Hecht, O., Krasnosdembskaya, A.D., Goldman, T., Gutsmann, T., Leippe, M.
Biochem. J. (2008), 410, 113-122, PubMed 17935487 , DOI 10.1042/BJ20071051 , Abstract

Entries sharing articles Swiss-Prot: 2 entries Detail

Related entities 1. arenicin monomer, : 1 : 1 : 3 : 1 : 5 entities Detail

Experiments performed 2 experiments Detail