Backbone and sidechain 1H, 13C, and 15N Chemical Shift Assignments for FimA
AATTVNGGTV HFKGEVVNAA CAVDAGSVDQ TVQLGQVRTA SLAQEGATSS AVGFNIQLND CDTNVASKAA VAFLGTAIDA GHTNVLALQS SAAGSATNVG VQILDRTGAA LTLDGATFSS ETTLNNGTNT IPFQARYFAT GAATPGAANA DATFKVQYQG GGGGGAATTV NGGTVHFKGE VVNA
ID | Type | Value order | Atom ID 1 | Atom ID 2 |
---|---|---|---|---|
1 | disulfide | sing | 1:CYS21:SG | 1:CYS61:SG |
Polymer type: polypeptide(L)
Total | 1H | 13C | 15N | |
---|---|---|---|---|
All | 92.5 % (1698 of 1836) | 89.2 % (813 of 911) | 94.4 % (680 of 720) | 100.0 % (205 of 205) |
Backbone | 98.3 % (1081 of 1100) | 97.7 % (382 of 391) | 98.1 % (517 of 527) | 100.0 % (182 of 182) |
Sidechain | 86.5 % (774 of 895) | 82.9 % (431 of 520) | 90.9 % (320 of 352) | 100.0 % (23 of 23) |
Aromatic | 38.0 % (41 of 108) | 22.2 % (12 of 54) | 53.7 % (29 of 54) | |
Methyl | 95.1 % (234 of 246) | 94.3 % (116 of 123) | 95.9 % (118 of 123) |
1. FimA
AATTVNGGTV HFKGEVVNAA CAVDAGSVDQ TVQLGQVRTA SLAQEGATSS AVGFNIQLND CDTNVASKAA VAFLGTAIDA GHTNVLALQS SAAGSATNVG VQILDRTGAA LTLDGATFSS ETTLNNGTNT IPFQARYFAT GAATPGAANA DATFKVQYQG GGGGGAATTV NGGTVHFKGE VVNAPressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Atom type | Mol. common name | Atom group | Value | Ref. method | Ref. type | Shift ratio |
---|---|---|---|---|---|---|
13C | DSS | methyl protons | 0.0 ppm | null | indirect | 0.2514495 |
1H | DSS | methyl protons | 0.0 ppm | internal | direct | 1.0 |
15N | DSS | methyl protons | 0.0 ppm | null | indirect | 0.1013291 |
Atom type | Mol. common name | Atom group | Value | Ref. method | Ref. type | Shift ratio |
---|---|---|---|---|---|---|
13C | DSS | methyl protons | 0.0 ppm | null | indirect | 0.2514495 |
1H | DSS | methyl protons | 0.0 ppm | internal | direct | 1.0 |
15N | DSS | methyl protons | 0.0 ppm | null | indirect | 0.1013291 |
Atom type | Mol. common name | Atom group | Value | Ref. method | Ref. type | Shift ratio |
---|---|---|---|---|---|---|
13C | DSS | methyl protons | 0.0 ppm | null | indirect | 0.2514495 |
1H | DSS | methyl protons | 0.0 ppm | internal | direct | 1.0 |
15N | DSS | methyl protons | 0.0 ppm | null | indirect | 0.1013291 |
Atom type | Mol. common name | Atom group | Value | Ref. method | Ref. type | Shift ratio |
---|---|---|---|---|---|---|
13C | DSS | methyl protons | 0.0 ppm | null | indirect | 0.2514495 |
1H | DSS | methyl protons | 0.0 ppm | internal | direct | 1.0 |
15N | DSS | methyl protons | 0.0 ppm | null | indirect | 0.1013291 |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Bruker Avance - 900 MHz
State isotropic, Pressure 1 atm, Temperature 298 K, pH 7.0
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | FimA | [U-98% 13C; U-98% 15N] | 1.7 mM | |
2 | sodium phosphate | natural abundance | 10 mM | |
3 | H2O | natural abundance | 50 M | |
4 | D2O | 5 M |
Properties
Input source #1: NMR data (NEF) - Assigned chemical shifts, Distance restraints | combined_15423_2jty.nef |
Input source #2: Coordindates | 2jty.cif |
Diamagnetism of the molecular assembly | True (excluding Oxygen atoms) |
Whether the assembly has a disulfide bond | True (see coordinates for details) |
Whether the assembly has a other bond | None |
Whether the assembly contains a cyclic polymer | None |
Overall data processing status | Warning |
Disulfide bonds
Ptnr_site_1 | Ptnr_site_2 | Redox_state_prediction_1 | Redox_state_prediction_2 | Distance (Ã…) |
---|---|---|---|---|
A:21:CYS:SG | A:61:CYS:SG | oxidized, CA 53.1, CB 50.5 ppm | oxidized, CA 56.8, CB 41.8 ppm | 2.035 |
Other bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)
NoneNon-standard residues
NoneSequence alignments
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100 AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVG |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVG -------110-------120-------130-------140-------150-------160-------170-------180---- VQILDRTGAALTLDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQYQGGGGGGAATTVNGGTVHFKGEVVNA |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| VQILDRTGAALTLDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQYQGGGGGGAATTVNGGTVHFKGEVVNA
Chain assignments
Entity_assembly_ID (NMR) | Auth_asym_ID (model) | Length | Unmapped | Conflict | Sequence coverage (%) |
---|---|---|---|---|---|
A | A | 184 | 0 | 0 | 100.0 |
Content subtype: combined_15423_2jty.nef
Assigned chemical shifts
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100 AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVG |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ..TTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVG -------110-------120-------130-------140-------150-------160-------170-------180---- VQILDRTGAALTLDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQYQGGGGGGAATTVNGGTVHFKGEVVNA |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| VQILDRTGAALTLDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQYQGGGGGGAATTVNGGTVHFKGEVVNA
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 911 | 812 | 89.1 |
13C chemical shifts | 720 | 680 | 94.4 |
15N chemical shifts | 208 | 206 | 99.0 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 391 | 383 | 98.0 |
13C chemical shifts | 368 | 358 | 97.3 |
15N chemical shifts | 182 | 180 | 98.9 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 520 | 429 | 82.5 |
13C chemical shifts | 352 | 322 | 91.5 |
15N chemical shifts | 26 | 26 | 100.0 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 123 | 117 | 95.1 |
13C chemical shifts | 123 | 119 | 96.7 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 54 | 12 | 22.2 |
13C chemical shifts | 54 | 29 | 53.7 |
Covalent bonds
Distance restraints
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100 AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVG |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ..TTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVG -------110-------120-------130-------140-------150-------160-------170-------180---- VQILDRTGAALTLDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQYQGGGGGGAATTVNGGTVHFKGEVVNA |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| VQILDRTGAALTLDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQYQGGGGGGAATTVNGGTVHFKGEVVNA