Search

GABPa OST domain
Authors
Kang, H., Nelson, M.L., Mackereth, C.D., Schaerpf, M., Graves, B.J., McIntosh, L.P.
Assembly
OST domain in GABP alpha
Entity
1. OST domain in GABP alpha (polymer, Thiol state: all free), 89 monomers, 9967.315 Da Detail

MAECVSQAID INEPIGNLKK LLEPRLQCSL DAHEICLQDI QLDPDRSLFD QGVKTDGTVQ LSVQVISYQG MEPKLNILEI VKTAETVEW


Formula weight
9967.315 Da
Source organism
Mus musculus
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts, coupling_constants, heteronucl_NOEs, heteronucl_T1_relaxation, heteronucl_T2_relaxation, order_parameters, RDCs
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 93.6 %, Completeness (bb): 97.5 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All93.6 % (973 of 1039)91.5 % (495 of 541)95.3 % (382 of 401)99.0 % (96 of 97)
Backbone97.5 % (513 of 526)97.8 % (174 of 178)97.0 % (255 of 263)98.8 % (84 of 85)
Sidechain91.0 % (544 of 598)88.4 % (321 of 363)94.6 % (211 of 223)100.0 % (12 of 12)
Aromatic91.2 % (31 of 34)88.2 % (15 of 17)93.8 % (15 of 16)100.0 % (1 of 1)
Methyl96.7 % (116 of 120)95.0 % (57 of 60)98.3 % (59 of 60)

1. OST (On-SighT)

MAECVSQAID INEPIGNLKK LLEPRLQCSL DAHEICLQDI QLDPDRSLFD QGVKTDGTVQ LSVQVISYQG MEPKLNILEI VKTAETVEW

Sample #1

Solvent system 90% H2O/10% D2O, Temperature 298.0 K, pH 7.0, Details uniformly 13C/15N labeled GABPa OST


#NameIsotope labelingTypeConcentration
1sodium phosphatenatural abundance20 mM
2sodium chloridenatural abundance20 mM
3GABPa OST[U-100% 13C; U-100% 15N]1 mM
4DTTnatural abundance2 mM
Sample #2

Solvent system 90% H2O/10% D2O, Temperature 298.0 K, pH 7.0, Details uniformly 15N labeled GABPa OST


#NameIsotope labelingTypeConcentration
5sodium phosphatenatural abundance20 mM
6sodium chloridenatural abundance50 mM
7GABPa OST[U-100% 15N]1 mM
8DTTnatural abundance2 mM
Sample #3

Solvent system 90% H2O/10% D2O, Temperature 298.0 K, pH 7.0, Details 10% 13C- and uniformly 15N- labeled GABPa OST


#NameIsotope labelingTypeConcentration
9sodium phosphatenatural abundance20 mM
10sodium chloridenatural abundance50 mM
11GABPa OST[U-10% 13C; U-100% 15N]1 mM
12DTTnatural abundance2 mM

LACS Plot; CA
Referencing offset: -0.13 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.13 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.11 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: 0.37 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 10 models in PDB: 2JUO, Strand ID: A Detail


Heteronucl. T1
78 T1 values in 1 lists
Coherence Sz, Field strength (1H) 500 MHz, Temperature 298.0 K, pH 7.0 Detail
Heteronucl. T2
78 T2 values in 1 lists
Coherence S(+,-), Field strength (1H) 500 MHz, Temperature 298.0 K, pH 7.0 Detail
Heteronucl. NOE
77 NOE values in 1 lists
Value type peak height, Field strength (1H) 500 MHz, Temperature 298.0 K, pH 7.0 Detail
Heteronucl. T1/T2
78 T1/T2 values in 1 lists
Field strength (1H) 500 MHz, Temperature 298.0 K, pH 7.0 Detail
Order parameters
77 S2 values in 1 lists
Temperature 298.0 K, pH 7.0 Detail
Coupling constant
57 J values in 1 lists
Field strength (1H) 600 MHz, Temperature 298.0 K, pH 7.0 Detail
RDC
50 RDC values in 1 lists
Field strength (1H) 600 MHz, Temperature 298.0 K, pH 7.0 Detail
Release date
2008-07-27
Citation
Identification and structural characterization of a CBP/p300-binding domain from the ETS family transcription factor GABP alpha
Kang, H., Nelson, M.L., Mackereth, C.D., Schaerpf, M., Graves, B.J., McIntosh, L.P.
J. Mol. Biol. (2008), 377, 636-646, PubMed 18295234 , DOI 10.1016/j.jmb.2008.01.054 ,
Related entities 1. OST domain in GABP alpha, : 1 : 2 : 12 entities Detail
Interaction partners 1. OST domain in GABP alpha, : 2 interactors Detail
Experiments performed 17 experiments Detail
nullKeywords Ets transcription factor, GABP, NMR ENSEMBLE, OST, GA-binding protein, NMR ensemble, transcription factor, ubiquitin