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Backbone and side chain 1H, 13C and 15N chemical shifts for the C-terminal domain of CdnL from Myxococcus xanthus
Authors
Mirassou, Y., Garcia-Moreno, D., Santiveri, C.M., Santoro, J., Elias-Arnanz, M., Padmanabhan, S., Jimenez, M.
Assembly
CdnLC
Entity
1. CdnLC (polymer, Thiol state: all free), 113 monomers, 13022.74 Da Detail

GSHMGSVGLR EIISEEDVKQ VYSILKEKDI SVDSTTWNRR YREYMEKIKT GSVFEIAEVL RDLYLLKGDK DLSFGERKML DTARSLLIKE LSLAKDCSED EIESDLKKIF NLA


Formula weight
13022.74 Da
Source organism
Myxococcus xanthus
Exptl. method
solution NMR
Refine. method
simulated annealing, molecular dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 99.1 %, Completeness: 96.5 %, Completeness (bb): 97.9 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All96.5 % (1302 of 1349)98.4 % (695 of 706)93.7 % (493 of 526)97.4 % (114 of 117)
Backbone97.9 % (664 of 678)97.8 % (227 of 232)98.2 % (327 of 333)97.3 % (110 of 113)
Sidechain95.6 % (744 of 778)98.7 % (468 of 474)90.7 % (272 of 300)100.0 % (4 of 4)
Aromatic71.8 % (56 of 78)97.4 % (38 of 39)44.7 % (17 of 38)100.0 % (1 of 1)
Methyl100.0 % (132 of 132)100.0 % (66 of 66)100.0 % (66 of 66)

1. CdnLC

GSHMGSVGLR EIISEEDVKQ VYSILKEKDI SVDSTTWNRR YREYMEKIKT GSVFEIAEVL RDLYLLKGDK DLSFGERKML DTARSLLIKE LSLAKDCSED EIESDLKKIF NLA

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 308 (±0.1) K, pH 7.0 (±0.1)


#NameIsotope labelingTypeConcentration
1CdnLC[U-100% 13C; U-100% 15N]1-2 mM
2sodium chloridenatural abundance150 mM
3sodium phosphatenatural abundance50 mM
4beta-mercaptoethanolnatural abundance2 mM
5sodium azidenatural abundance0.05 %
6DSSnatural abundance0.2 mM
Sample #2

Solvent system 100% D2O, Pressure 1 atm, Temperature 308 (±0.1) K, pH 7.0 (±0.1)


#NameIsotope labelingTypeConcentration
7CdnLC[U-100% 13C; U-100% 15N]2 mM
8sodium chloridenatural abundance150 mM
9sodium phosphatenatural abundance50 mM
10beta-mercaptoethanolnatural abundance2 mM
11sodium azidenatural abundance0.05 %
12DSSnatural abundance0.2 mM
Sample #3

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 308 (±0.1) K, pH 7.0 (±0.1)


#NameIsotope labelingTypeConcentration
13CdnLCnatural abundance1.5 mM
14sodium chloridenatural abundance150 mM
15sodium phosphatenatural abundance50 mM
16beta-mercaptoethanolnatural abundance2 mM
17sodium azidenatural abundance0.05 %
18DSSnatural abundance0.2 mM
Sample #4

Solvent system 100% D2O, Pressure 1 atm, Temperature 308 (±0.1) K, pH 7.0 (±0.1)


#NameIsotope labelingTypeConcentration
19CdnLCnatural abundance1.5 mM
20sodium chloridenatural abundance150 mM
21sodium phosphatenatural abundance50 mM
22beta-mercaptoethanolnatural abundance2 mM
23sodium azidenatural abundance0.05 %
24DSSnatural abundance0.2 mM

LACS Plot; CA
Referencing offset: -0.17 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.17 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: 0.02 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: -0.47 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2LT3, Strand ID: A Detail


Release date
2008-11-14
Citation
1H, 13C and 15N backbone and side chain resonance assignments of the C-terminal domain of CdnL from Myxococcus xanthus
Mirassou, Y., Garcia-Moreno, D., Santiveri, C.M., Santoro, J., Elias-Arnanz, M., Padmanabhan, S., Jimenez, M.
Biomol. NMR Assign. (2009), 3, 9-12, PubMed 19636935 , DOI 10.1007/s12104-008-9128-2 ,
Related entities 1. CdnLC, : 1 : 8 entities Detail
Experiments performed 23 experiments Detail
NMR combined restraints 4 contents Detail
Keywords CarD, Myxococcus xanthus, NMR, PF02559