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Solution NMR structure of SSP0047 from Staphylococcus saprophyticus. Northeast Structural Genomics Consortium Target SyR6.
Authors
Ramelot, T.A., Ding, K., Chen, C.X., Jiang, M., Ciccosanti, C., Xiao, R., Liu, J., Baran, M.C., Swapna, G., Acton, T.B., Rost, B., Montelione, G.T., Kennedy, M.A.
Assembly
SSP0047
Entity
1. SSP0047 (polymer, Thiol state: all free), 120 monomers, 14381.12 Da Detail

MTLELQLKHY ITNLFNLPRD EKWECESIEE VADDILPDQY VRLGPLSNKI LQTNTYYSDT LHKSNIYPFI LYYQKQLIAI GFIDENHDMD FLYLHNTVMP LLDQRYLLTG GQLEHHHHHH


Formula weight
14381.12 Da
Source organism
Staphylococcus saprophyticus
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 94.2 %, Completeness: 91.3 %, Completeness (bb): 92.3 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All91.3 % (1357 of 1486)91.0 % (701 of 770)91.3 % (535 of 586)93.1 % (121 of 130)
Backbone92.3 % (655 of 710)92.1 % (220 of 239)92.1 % (328 of 356)93.0 % (107 of 115)
Sidechain90.9 % (811 of 892)90.6 % (481 of 531)91.3 % (316 of 346)93.3 % (14 of 15)
Aromatic75.0 % (123 of 164)75.6 % (62 of 82)74.1 % (60 of 81)100.0 % (1 of 1)
Methyl99.3 % (141 of 142)98.6 % (70 of 71)100.0 % (71 of 71)

1. SSP0047

MTLELQLKHY ITNLFNLPRD EKWECESIEE VADDILPDQY VRLGPLSNKI LQTNTYYSDT LHKSNIYPFI LYYQKQLIAI GFIDENHDMD FLYLHNTVMP LLDQRYLLTG GQLEHHHHHH

Sample #1

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 273 (±0.5) K, pH 6.5 (±0.1), Details slow precipitator


#NameIsotope labelingTypeConcentration
1MESnatural abundance20 (±1.0) mM
2sodium chloridenatural abundance100 (±10.0) mM
3calcium chloridenatural abundance5 (±0.25) mM
4DTTnatural abundance10 (±0.5) mM
5sodium azidenatural abundance0.02 (±0.001) %
6protein[U-100% 13C; U-100% 15N]0.3 (±0.05) mM
7H2Onatural abundance95 %
8D2Onatural abundance5 %
Sample #2

Solvent system 100% D2O, Pressure 1 atm, Temperature 273 (±0.5) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
9MESnatural abundance20 (±1.0) mM
10sodium chloridenatural abundance100 (±5.0) mM
11calcium chloridenatural abundance5 (±0.25) mM
12DTTnatural abundance10 (±0.5) mM
13sodium azidenatural abundance0.02 (±0.001) %
14protein[U-100% 13C; U-100% 15N]0.3 (±0.05) mM
15D2Onatural abundance100 %
Sample #3

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 273 (±0.5) K, pH 6.5 (±0.1), Details slow precipitator


#NameIsotope labelingTypeConcentration
16MESnatural abundance20 (±1.0) mM
17sodium chloridenatural abundance100 (±10.0) mM
18calcium chloridenatural abundance5 (±0.25) mM
19DTTnatural abundance10 (±0.5) mM
20sodium azidenatural abundance0.02 (±0.001) %
21protein[U-5% 13C; U-100% 15N]0.3 (±0.05) mM
22H2Onatural abundance95 %
23D2Onatural abundance5 %

LACS Plot; CA
Referencing offset: 0.14 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: 0.14 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.02 ppm, Outliers: 2 Detail
LACS Plot; CO
Referencing offset: 0.82 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2KCD, Strand ID: A Detail


Release date
2009-02-16
Citation
Solution NMR structure of SSP0047 from Staphylococcus saprophyticus. Northeast Structural Genomics Consortium Target SyR6
Ramelot, T.A., Ding, K., Chen, C.X., Jiang, M., Ciccosanti, C., Xiao, R., Liu, J., Baran, M.C., Swapna, G., Acton, T.B., Rost, B., Montelione, G.T., Kennedy, M.A.
Not known
Related entities 1. SSP0047, : 1 : 5 entities Detail
Experiments performed 19 experiments Detail
NMR combined restraints 5 contents Detail
Keywords alpha beta