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Solution NMR structure of the domain N-terminal to the integrase domain of SH1003 from Staphylococcus haemolyticus. Northeast Structural Genomics Consortium Target ShR105F (64-166).
Authors
Yang, Y., Ramelot, T.A., Belote, R.L., Foote, E.L., Janjua, H., Nair, R., Rost, B., Swapna, G., Acton, T.B., Xiao, R., Everett, J.K., Montelio, G.T., Kennedy, M.A.
Assembly
SH1003
Entity
1. SH1003 (polymer, Thiol state: not present), 111 monomers, 13094.74 Da Detail

TFKQVADDWL KQYANDVKVS SVRAREKAIQ HAIERFNTKP IQTIKKHDYQ RFVDDISAQY SKNYVDSIVA STNMIFKYAY DTRLIKAMPS EGIKRPKKKV SVELEHHHHH H


Formula weight
13094.74 Da
Source organism
Staphylococcus haemolyticus
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 97.3 %, Completeness: 95.3 %, Completeness (bb): 96.2 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All95.3 % (1302 of 1366)95.5 % (684 of 716)94.7 % (503 of 531)96.6 % (115 of 119)
Backbone96.2 % (635 of 660)96.8 % (213 of 220)95.8 % (318 of 332)96.3 % (104 of 108)
Sidechain94.9 % (774 of 816)95.0 % (471 of 496)94.5 % (292 of 309)100.0 % (11 of 11)
Aromatic79.5 % (105 of 132)80.3 % (53 of 66)78.5 % (51 of 65)100.0 % (1 of 1)
Methyl100.0 % (112 of 112)100.0 % (56 of 56)100.0 % (56 of 56)

1. SH1003

TFKQVADDWL KQYANDVKVS SVRAREKAIQ HAIERFNTKP IQTIKKHDYQ RFVDDISAQY SKNYVDSIVA STNMIFKYAY DTRLIKAMPS EGIKRPKKKV SVELEHHHHH H

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 293 (±1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
1SH1003[U-100% 13C; U-100% 15N]0.84 (±0.1) mM
2MESnatural abundance20 (±1.0) mM
3sodium chloridenatural abundance200 (±10.0) mM
4calcium chloridenatural abundance5 (±0.2) mM
5DTTnatural abundance10 (±0.5) mM
6sodium azidenatural abundance0.02 (±0.001) %
7H2Onatural abundance90 %
8D2Onatural abundance10 %
Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 293 (±1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
9SH1003natural abundance0.79 (±0.1) mM
10MESnatural abundance20 (±1.0) mM
11sodium chloridenatural abundance200 (±10.0) mM
12calcium chloridenatural abundance5 (±0.2) mM
13DTTnatural abundance10 (±0.5) mM
14sodium azidenatural abundance0.02 (±0.001) %
15H2Onatural abundance90 %
16D2Onatural abundance10 %
Sample #3

Solvent system 100% D2O, Pressure 1 atm, Temperature 293 (±1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
17SH1003[U-100% 13C; U-100% 15N]0.84 (±0.1) mM
18MESnatural abundance20 (±1.0) mM
19sodium chloridenatural abundance200 (±10.0) mM
20calcium chloridenatural abundance5 (±0.2) mM
21DTTnatural abundance10 (±0.5) mM
22sodium azidenatural abundance0.02 (±0.001) %
23D2Onatural abundance100 %

LACS Plot; CA
Referencing offset: -0.09 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.09 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: 0.05 ppm, Outliers: 2 Detail
LACS Plot; CO
Referencing offset: -0.15 ppm, Outliers: 4 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2KIW, Strand ID: A Detail


Release date
2009-06-10
Citation
Solution NMR structure of the domain N-terminal to the integrase domain of SH1003 from Staphylococcus haemolyticus. Northeast Structural Genomics Consortium Target ShR105F (64-166)
Yang, Y., Ramelot, T.A., Belote, R.L., Foote, E.L., Janjua, H., Nair, R., Rost, B., Swapna, G., Acton, T.B., Xiao, R., Everett, J.K., Montelio, G.T., Kennedy, M.A.
Not known
Related entities 1. SH1003, : 1 : 4 entities Detail
Experiments performed 19 experiments Detail
NMR combined restraints 5 contents Detail
Keywords alpha