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Human Jagged-1, exon 6
Authors
Pintar, A., Guarnaccia, C., Pongor, S.
Assembly
Exon 6 of human Jagged-1
Entity
1. Exon 6 of human Jagged-1 (polymer, Thiol state: all disulfide bound), 44 monomers, 5043.741 Da Detail

RCQYGWQGLY CDKCIPHPGC VHGICNEPWQ CLCETNWGGQ LCDK


Formula weight
5043.741 Da
Entity Connection
disulfide 4 Detail

IDTypeValue orderAtom ID 1Atom ID 2
1disulfidesing1:CYS2:SG1:CYS11:SG
2disulfidesing1:CYS14:SG1:CYS25:SG
3disulfidesing1:CYS20:SG1:CYS31:SG
4disulfidesing1:CYS33:SG1:CYS42:SG

Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 98.5 %, Completeness (bb): 98.9 % Detail

Polymer type: polypeptide(L)

Total1H
All98.5 % (262 of 266)98.5 % (262 of 266)
Backbone98.9 % (90 of 91)98.9 % (90 of 91)
Sidechain98.3 % (172 of 175)98.3 % (172 of 175)
Aromatic100.0 % (30 of 30)100.0 % (30 of 30)
Methyl100.0 % (13 of 13)100.0 % (13 of 13)

1. Exon 6 of human Jagged-1

RCQYGWQGLY CDKCIPHPGC VHGICNEPWQ CLCETNWGGQ LCDK

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 4.5


#NameIsotope labelingTypeConcentration
1JAG1natural abundance0.5 mM
2H2Onatural abundance90 %
3D2Onatural abundance10 %
Sample #2

Solvent system 100% D2O, Pressure 1 atm, Temperature 298 K, pH 4.5


#NameIsotope labelingTypeConcentration
4JAG1natural abundance0.5 mM
5D2Onatural abundance100 %

Protein Blocks Logo
Calculated from 20 models in PDB: 2KB9, Strand ID: A Detail


Release date
2010-05-18
Citation 1
Exon 6 of human JAG1 encodes a conserved structural unit
Pintar, A., Guarnaccia, C., Dhir, S., Pongor, S.
BMC Struct. Biol. (2009), 9, 43-43, PubMed 19586525 , DOI 10.1186/1472-6807-9-43 ,
Citation 2
Exon 6 of human Jagged-1 encodes an autonomously folding unit
Guarnaccia, C., Pintar, A., Pongor, S.
FEBS Lett. (2004), 574, 156-160, PubMed 15358557 , DOI 10.1016/j.febslet.2004.08.022 ,
Related entities 1. Exon 6 of human Jagged-1, : 1 : 7 : 5 : 332 entities Detail
Interaction partners 1. Exon 6 of human Jagged-1, : 7 interactors Detail
Experiments performed 6 experiments Detail
NMR combined restraints 3 contents Detail
Keywords EGF, notch signaling