Solution NMR Structure of a putative Uracil DNA glycosylase from Methanosarcina acetivorans, Northeast Structural Genomics Consortium Target MvR76
MIKRGFPAVL DENTEILILG SLPSDESIRK QQYYGNPGND FWRLVGHAIG ENLQDMAYEK KLKTLKHNRI GLWDVFKAGS REGSQDSKIG DEEINDFSGL KEMVPKLRLI CFNGRKAGEY EPLLRGMGYE TKVLPSSSGA NRRFSKNRES EWEAVFRHLE HHHHHH
Polymer type: polypeptide(L)
Total | 1H | 13C | 15N | |
---|---|---|---|---|
All | 92.5 % (1837 of 1986) | 92.2 % (965 of 1047) | 92.0 % (702 of 763) | 96.6 % (170 of 176) |
Backbone | 95.5 % (940 of 984) | 95.9 % (328 of 342) | 95.0 % (458 of 482) | 96.2 % (154 of 160) |
Sidechain | 90.0 % (1037 of 1152) | 89.6 % (632 of 705) | 90.3 % (389 of 431) | 100.0 % (16 of 16) |
Aromatic | 74.2 % (135 of 182) | 74.7 % (68 of 91) | 72.7 % (64 of 88) | 100.0 % (3 of 3) |
Methyl | 97.2 % (140 of 144) | 97.2 % (70 of 72) | 97.2 % (70 of 72) |
1. MvR76
MIKRGFPAVL DENTEILILG SLPSDESIRK QQYYGNPGND FWRLVGHAIG ENLQDMAYEK KLKTLKHNRI GLWDVFKAGS REGSQDSKIG DEEINDFSGL KEMVPKLRLI CFNGRKAGEY EPLLRGMGYE TKVLPSSSGA NRRFSKNRES EWEAVFRHLE HHHHHHSolvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 0.94 mM [U-100% 13C; U-100% 15N] MvR76, 90% H2O/10% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | MvR76 | [U-100% 13C; U-100% 15N] | 0.94 mM | |
2 | MES | natural abundance | 20 mM | |
3 | sodium chloride | natural abundance | 100 mM | |
4 | calcium chloride | natural abundance | 5 mM | |
5 | DTT | natural abundance | 10 mM | |
6 | sodium azide | natural abundance | 0.02 % | |
7 | DSS | natural abundance | 50 uM | |
8 | H2O | natural abundance | 90 % | |
9 | D2O | natural abundance | 10 % |
Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 1.15 mM [U-5% 13C; U-100% 15N] MvR76, 90% H2O/10% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
10 | MvR76 | [U-5% 13C; U-100% 15N] | 1.15 mM | |
11 | MES | natural abundance | 20 mM | |
12 | sodium chloride | natural abundance | 100 mM | |
13 | calcium chloride | natural abundance | 5 mM | |
14 | DTT | natural abundance | 10 mM | |
15 | sodium azide | natural abundance | 0.02 % | |
16 | DSS | natural abundance | 50 uM | |
17 | H2O | natural abundance | 90 % | |
18 | D2O | natural abundance | 10 % |
Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 15N MvR76 aligned in 4% C12E5 PEG
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
19 | MvR76 | [U-5% 13C; U-100% 15N] | 0.80 mM | |
20 | MES | natural abundance | 20 mM | |
21 | sodium chloride | natural abundance | 100 mM | |
22 | calcium chloride | natural abundance | 5 mM | |
23 | DTT | natural abundance | 10 mM | |
24 | sodium azide | natural abundance | 0.02 % | |
25 | DSS | natural abundance | 50 uM | |
26 | C12E5 PEG | natural abundance | 4 % | |
27 | H2O | natural abundance | 90 % | |
28 | D2O | natural abundance | 10 % |
Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 15N MvR76 aligned in 7% PAG
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
29 | MvR76 | [U-5% 13C; U-100% 15N] | 1.15 mM | |
30 | MES | natural abundance | 20 mM | |
31 | sodium chloride | natural abundance | 100 mM | |
32 | calcium chloride | natural abundance | 5 mM | |
33 | DTT | natural abundance | 10 mM | |
34 | sodium azide | natural abundance | 0.02 % | |
35 | DSS | natural abundance | 50 uM | |
36 | Polyacrylamide gel | natural abundance | 7 % | |
37 | H2O | natural abundance | 90 % | |
38 | D2O | natural abundance | 10 % |