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Solution structure of Rap1-Taz1 fusion protein
Authors
Zhou, Z., Wang, F., Chen, Y., Lei, M., Hu, H.
Assembly
spRT6
Entity
1. spRT6 (polymer, Thiol state: all free), 104 monomers, 11102.21 Da Detail

SVSILRSSVN HREVDEAIDN ILRYTNSTEQ QFLEAMESTG GRVRIAIAKL LSKQTSGGSG GSKLGGSGGS RKDLSVKGML YDSDSQQILN RLRERVSGST AQSA


Formula weight
11102.21 Da
Source organism
Schizosaccharomyces pombe
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 91.3 %, Completeness: 78.2 %, Completeness (bb): 86.9 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All78.2 % (888 of 1135)72.0 % (426 of 592)86.9 % (373 of 429)78.1 % (89 of 114)
Backbone86.9 % (542 of 624)83.2 % (183 of 220)90.0 % (270 of 300)85.6 % (89 of 104)
Sidechain71.5 % (431 of 603)65.3 % (243 of 372)85.1 % (188 of 221) 0.0 % (0 of 10)
Aromatic10.0 % (3 of 30)20.0 % (3 of 15) 0.0 % (0 of 15)
Methyl92.7 % (102 of 110)90.9 % (50 of 55)94.5 % (52 of 55)

1. spRT6

SVSILRSSVN HREVDEAIDN ILRYTNSTEQ QFLEAMESTG GRVRIAIAKL LSKQTSGGSG GSKLGGSGGS RKDLSVKGML YDSDSQQILN RLRERVSGST AQSA

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5


#NameIsotope labelingTypeConcentration
1spRT6[U-99% 13C; U-99% 15N]1.1 mM
2sodium phosphatenatural abundance20 mM
3sodium chloridenatural abundance50 mM
4DTTnatural abundance1 mM
5H2Onatural abundance90 %
6D2Onatural abundance10 %
Sample #2

Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5


#NameIsotope labelingTypeConcentration
7spRT6[U-99% 15N]0.6 mM
8sodium phosphatenatural abundance20 mM
9sodium chloridenatural abundance50 mM
10DTTnatural abundance1 mM
11H2Onatural abundance93 %
12D2Onatural abundance7 %

LACS Plot; CA
Referencing offset: -0.13 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.13 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.05 ppm, Outliers: 2 Detail
LACS Plot; CO
Referencing offset: -0.22 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2L3N, Strand ID: A Detail


Release date
2011-03-29
Citation
A conserved motif within RAP1 has diversified roles in telomere protection and regulation in different organisms
Chen, Y., Rai, R., Zhou, Z., Kanoh, J., Ribeyre, C., Yang, Y., Zheng, H., Damay, P., Wang, F., Tsujii, H., Hiraoka, Y., Shore, D., Hu, H., Chang, S., Lei, M.
Nat. Struct. Mol. Biol. (2011), 18, 213-221, PubMed 21217703 , DOI 10.1038/nsmb.1974 ,
Related entities 1. spRT6, : 1 : 6 entities Detail
Experiments performed 13 experiments Detail
nullKeywords spRT6