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Solution NMR structure of conjugate transposon protein BVU_1572(27-141) from Bacteroides Vulgatus, Northeast Structural Genomics Consortium Target BvR155.
Authors
Yang, Y., Ramelot, T.A., Cort, J.R., Wang, D., Ciccosanti, C., Janjua, H., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Kennedy, M.A.
Assembly
protein BVU 1572(27-141)
Entity
1. protein BVU 1572(27-141) (polymer, Thiol state: not available), 248 monomers, 29272.04 Da Detail

MNELDIQQEY PFTVESMPVA DEIAGDETVE IRLEIKPSGN FIGTVYTLRY FQPDGKGSLK MEDGTVLKPN DRYLLNEWKF RLYYTSQSDK EAQTIDLYFE DNWGNLQQLT YDFNGKLEHH HHHHMNELDI QQEYPFTVES MPVADEIAGD ETVEIRLEIK PSGNFIGTVY TLRYFQPDGK GSLKMEDGTV LKPNDRYLLN EWKFRLYYTS QSDKEAQTID LYFEDNWGNL QQLTYDFNGK LEHHHHHH


Formula weight
29272.04 Da
Source organism
Phocaeicola vulgatus
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 62.5 %, Completeness: 54.1 %, Completeness (bb): 57.8 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All54.1 % (1625 of 3002)53.7 % (840 of 1564)53.4 % (624 of 1168)59.6 % (161 of 270)
Backbone57.8 % (848 of 1468)58.0 % (291 of 502)57.0 % (415 of 728)59.7 % (142 of 238)
Sidechain51.6 % (911 of 1766)51.7 % (549 of 1062)51.0 % (343 of 672)59.4 % (19 of 32)
Aromatic39.2 % (135 of 344)40.1 % (69 of 172)38.1 % (64 of 168)50.0 % (2 of 4)
Methyl53.9 % (123 of 228)54.4 % (62 of 114)53.5 % (61 of 114)

1. protein BVU

MNELDIQQEY PFTVESMPVA DEIAGDETVE IRLEIKPSGN FIGTVYTLRY FQPDGKGSLK MEDGTVLKPN DRYLLNEWKF RLYYTSQSDK EAQTIDLYFE DNWGNLQQLT YDFNGKLEHH HHHHMNELDI QQEYPFTVES MPVADEIAGD ETVEIRLEIK PSGNFIGTVY TLRYFQPDGK GSLKMEDGTV LKPNDRYLLN EWKFRLYYTS QSDKEAQTID LYFEDNWGNL QQLTYDFNGK LEHHHHHH

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 293 (±1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
1conjugate transposon protein BVU_1572(27-141)[U-100% 13C; U-100% 15N]0.53 (±0.05) mM
2MESnatural abundance20 (±1.0) mM
3sodium chloridenatural abundance100 (±5.0) mM
4calcium chloridenatural abundance5 (±0.25) mM
5sodium azidenatural abundance0.02 (±0.001) mM
6DTTnatural abundance10 (±0.5) mM
7D2Onatural abundance10 %
8H2Onatural abundance90 %
Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 293 (±1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
9conjugate transposon protein BVU_1572(27-141)[U-5% 13C; U-100% 15N]0.48 (±0.05) mM
10MESnatural abundance20 (±1.0) mM
11sodium chloridenatural abundance100 (±5.0) mM
12calcium chloridenatural abundance5 (±0.25) mM
13DTTnatural abundance10 (±0.5) mM
14sodium azidenatural abundance0.02 (±0.001) mM
15D2Onatural abundance10 %
16H2Onatural abundance90 %
Sample #3

Solvent system 100% D2O, Pressure 1 atm, Temperature 293 (±1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
17conjugate transposon protein BVU_1572(27-141)[U-100% 13C; U-100% 15N]0.53 (±0.05) mM
18MESnatural abundance20 (±1.0) mM
19sodium chloridenatural abundance100 (±5.0) mM
20calcium chloridenatural abundance5 (±0.25) mM
21sodium azidenatural abundance0.02 (±0.001) %
22DTTnatural abundance10 (±0.5) mM
23D2Onatural abundance100 %

LACS Plot; CA
Referencing offset: 0.08 ppm, Outliers: 4 Detail
LACS Plot; CB
Referencing offset: 0.08 ppm, Outliers: 4 Detail
LACS Plot; HA
Referencing offset: -0.05 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: 0.85 ppm, Outliers: 1 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2L7Q, Strand ID: A Detail


Release date
2011-01-04
Citation
Solution NMR structure of conjugate transposon protein BVU_1572(27-141) from Bacteroides Vulgatus, Northeast Structural Genomics Consortium Target BvR155
Yang, Y., Ramelot, T.A., Cort, J.R., Wang, D., Ciccosanti, C., Janjua, H., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Kennedy, M.A.
Not known
Experiments performed 27 experiments Detail
nullKeywords Bacteroides Vulgatus, conjugate transposon protein, NESG, NMR structure