Properties

Disulfide bonds

Other bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)

Non-standard residues

Sequence alignments

• Entity_assembly_ID (NMR): A vs Auth_asym_ID (model): A

--------10-------
GGGACCUUCCCGGUCUC
|||||||||||||||||
GGGACCUUCCCGGUCUC

Chain assignments

Content subtype: combined_17564_2lbk.nef

Assigned chemical shifts

1. Saveframe: assigned_chem_shift_list_1
   • Status: OK
   • Sequence coverage of experimental data
     • Entity_assembly_ID: A, Chain length: 17, Sequence coverage: 100.0%

     --------10-------
     GGGACCUUCCCGGUCUC
     |||||||||||||||||
     GGGACCUUCCCGGUCUC
     

   • Total number of assignments
     • ¹H chemical shifts: 107
     • ¹³C chemical shifts: 87
   • Completeness of assignments
     • Entity_assemble_ID: A
       • All atoms

         Atom group	# of target shifts	# of assigned shifts	Completeness (%)
         1H chemical shifts	154	107	69.5
         13C chemical shifts	114	87	76.3

       • Backbone atoms

         Atom group	# of target shifts	# of assigned shifts	Completeness (%)
         1H chemical shifts	102	81	79.4
         13C chemical shifts	85	64	75.3

       • Side chain atoms

         Atom group	# of target shifts	# of assigned shifts	Completeness (%)
         1H chemical shifts	52	26	50.0
         13C chemical shifts	29	23	79.3

       • Methyl group atoms

         Atom group	# of target shifts	# of assigned shifts	Completeness (%)

       • Aromatic group atoms

         Atom group	# of target shifts	# of assigned shifts	Completeness (%)
         1H chemical shifts	7	6	85.7
         13C chemical shifts	7	6	85.7

   • Histogram of normalized assigned chemical shifts

Distance restraints

1. Saveframe: CNS/XPLOR_distance_constraints_2
   • Status: OK
   • Experiment type: noe
   • Sequence coverage of experimental data
     • Entity_assembly_ID: A, Chain length: 17, Sequence coverage: 100.0%

     --------10-------
     GGGACCUUCCCGGUCUC
     |||||||||||||||||
     GGGACCUUCCCGGUCUC
     

   • Total number of restraints: 205
     • Intra-residue restraints, i = j : 110
     • Sequential restraints, | i - j | = 1 : 94
       • Backbone-backbone: 20
       • Backbone-side chain: 50
       • Side chain-side chain: 24
     • Long range restraints, | i - j | >= 5 : 1
   • Weight of restraints: 1.0 (205)
     • Intra-residue restraints, i = j : 1.0 (110)
     • Sequential restraints, | i - j | = 1 : 1.0 (94)
       • Backbone-backbone: 1.0 (20)
       • Backbone-side chain: 1.0 (50)
       • Side chain-side chain: 1.0 (24)
     • Long range restraints, | i - j | >= 5 : 1.0 (1)
   • Potential type of restraints: square-well-parabolic (205)
     • Intra-residue restraints, i = j : square-well-parabolic (110)
     • Sequential restraints, | i - j | = 1 : square-well-parabolic (94)
       • Backbone-backbone: square-well-parabolic (20)
       • Backbone-side chain: square-well-parabolic (50)
       • Side chain-side chain: square-well-parabolic (24)
     • Long range restraints, | i - j | >= 5 : square-well-parabolic (1)
   • Range of distance target values: 1.45, 4.4 (Å)
   • Histogram of distance target values
   • Distance restraints per residue
     • Chain_ID: A
   • Distance restraints on contact map
     • Chain_ID_1: A - Chain_ID_2: A
   • Saveframe: CNS/XPLOR_distance_constraints_4
     • Status: OK
     • Experiment type: hbond
     • Sequence coverage of experimental data
       • Entity_assembly_ID: A, Chain length: 17, Sequence coverage: 70.6%

       --------10-------
       GGGACCUUCCCGGUCUC
       ||||||     ||||||
       GGGACC.....GGUCUC
       

     • Total number of restraints: 32
       • Total hydrogen bond restraints: 32
     • Weight of restraints: 1.0 (32)
       • Total hydrogen bond restraints: 1.0 (32)
     • Potential type of restraints: square-well-parabolic (32)
       • Total hydrogen bond restraints: square-well-parabolic (32)
     • Range of distance target values: 2.1, 3.05 (Å)
     • Histogram of distance target values
     • Distance restraints per residue
       • Chain_ID: A
     • Distance restraints on contact map
       • Chain_ID_1: A - Chain_ID_2: A

Dihedral angle restraints

1. Saveframe: CNS/XPLOR_dihedral_3
   • Status: OK
   • Experiment type: .
   • Sequence coverage of experimental data
     • Entity_assembly_ID: A, Chain length: 17, Sequence coverage: 100.0%

     --------10-------
     GGGACCUUCCCGGUCUC
     |||||||||||||||||
     GGGACCUUCCCGGUCUC
     

   • Total number of restraints: 156
     • Beta angle constraints: 16
     • Gamma angle constraints: 12
     • Epsilon angle constraints: 16
     • Alpha angle constraints: 16
     • Zeta angle constraints: 16
     • Delta angle constraints: 17
     • Undefined angle constraints: 63
   • Total number of restraints per polymer type: 156
     • Nucleic acid: 156
   • Weight of restraints: 1.0 (156)
     • Beta angle constraints: 1.0 (16)
     • Gamma angle constraints: 1.0 (12)
     • Epsilon angle constraints: 1.0 (16)
     • Alpha angle constraints: 1.0 (16)
     • Zeta angle constraints: 1.0 (16)
     • Delta angle constraints: 1.0 (17)
     • Undefined angle constraints: 1.0 (63)
   • Potential type of restraints: square-well-parabolic (156)
     • Beta angle constraints: square-well-parabolic (16)
     • Gamma angle constraints: square-well-parabolic (12)
     • Epsilon angle constraints: square-well-parabolic (16)
     • Alpha angle constraints: square-well-parabolic (16)
     • Zeta angle constraints: square-well-parabolic (16)
     • Delta angle constraints: square-well-parabolic (17)
     • Undefined angle constraints: square-well-parabolic (63)
   • Dihedral angle restraints per residue
     • Chain_ID: A