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Myc G-quadruplex formed at the 5'-end of NHEIII element
Authors
Mathad, R., Hatzakis, E., Yang, D.
Assembly
Myc G-quadruplex
Entity
1. Myc G-quadruplex (polymer, Thiol state: not present), 19 monomers, 6133.889 Da Detail

TAGGGAGGGT AGGGAGGGT


Formula weight
6133.889 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 89.1 %, Completeness (bb): 88.7 % Detail

Polymer type: polydeoxyribonucleotide

Total1H
All89.1 % (155 of 174)89.1 % (155 of 174)
Suger, PO488.7 % (118 of 133)88.7 % (118 of 133)
Nucleobase90.2 % (37 of 41)90.2 % (37 of 41)
Aromatic89.5 % (34 of 38)89.5 % (34 of 38)
Methyl100.0 % (3 of 3)100.0 % (3 of 3)

1. DNA G-quadruplex

TAGGGAGGGT AGGGAGGGT

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.0


#NameIsotope labelingTypeConcentration
1DNA G-quadruplexnatural abundance1 mM
2H20natural abundance90 %
3D2Onatural abundance10% %

Release date
2012-02-09
Citation
c-MYC promoter G-quadruplex formed at the 5'-end of NHE III1 element: insights into biological relevance and parallel-stranded G-quadruplex stability
Mathad, R.I., Hatzakis, E., Dai, J., Yang, D.
Nucleic Acids Res. (2011), 39, 9023-9033, PubMed 21795379 , DOI 10.1093/nar/gkr612 ,
Experiments performed 1 experiments Detail
NMR combined restraints 3 contents Detail
Keywords cMyc, G-quadruplex, NMR structure determination