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UNAC Tetraloops: To What Extent Can They Mimic GNRA Tetraloops
Authors
Zhao, Q., Huang, H., Nagaswamy, U., Xia, Y., Gao, X., Fox, G.E.
Assembly
UNAC Tetraloops
Entity
1. UNAC Tetraloops (polymer, Thiol state: not present), 22 monomers, 7103.205 Da Detail

GGACCCGGCU CACGCUGGGU CC


Formula weight
7103.205 Da
Source organism
Thermus thermophilus
Exptl. method
solution NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 45.2 %, Completeness (bb): 41.7 % Detail

Polymer type: polyribonucleotide

Total1H
All45.2 % (89 of 197)45.2 % (89 of 197)
Suger, PO441.7 % (55 of 132)41.7 % (55 of 132)
Nucleobase52.3 % (34 of 65)52.3 % (34 of 65)
Aromatic72.3 % (34 of 47)72.3 % (34 of 47)

1. UCAC

GGACCCGGCU CACGCUGGGU CC

Sample

Solvent system 99.96% D2O, Pressure 1 atm, Temperature 298.000 K, pH 7.000, Details 0.3 mM


#NameIsotope labelingTypeConcentration
1UCAC[U-13C; U-15N]0.3 mM
2D2Onatural abundance99.96 %

Release date
2012-05-21
Citation
UNAC tetraloops: to what extent do they mimic GNRA tetraloops?
Zhao, Q., Huang, H., Nagaswamy, U., Xia, Y., Gao, X., Fox, G.E.
Biopolymers (2012), 97, 617-628, PubMed 22605553 , DOI 10.1002/bip.22049 ,
Related entities 1. UNAC Tetraloops, : 1 : 3 entities Detail
Experiments performed 1 experiments Detail
NMR combined restraints 3 contents Detail
Keywords evolution, GNRA tetraloop, NMR, RNA, structure, UMAC tetraloop