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Structure, Activity and Interactions of the Cysteine Deleted Analog of Tachyplesin-1 with Lipopolysaccharide Micelles
Authors
Joshi, M., Bhattacharjya, S., Saravanan, R.
Assembly
Cysteine Deleted Analog of Tachyplesin-1
Entity
1. Cysteine Deleted Analog of Tachyplesin-1 (polymer, Thiol state: not present), 13 monomers, 1856.187 Da Detail

KWFRVYRGIY RRR


Formula weight
1856.187 Da
Source organism
Tachypleus tridentatus
Exptl. method
solution NMR
Refine. method
torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 75.2 %, Completeness (bb): 96.3 % Detail

Polymer type: polypeptide(L)

Total1H
All75.2 % (79 of 105)75.2 % (79 of 105)
Backbone96.3 % (26 of 27)96.3 % (26 of 27)
Sidechain67.9 % (53 of 78)67.9 % (53 of 78)
Aromatic42.1 % (8 of 19)42.1 % (8 of 19)
Methyl75.0 % (3 of 4)75.0 % (3 of 4)

1. CDT-LPS

KWFRVYRGIY RRR

Sample

Solvent system 100% D2O, Pressure 1 atm, Temperature 298 K, pH 4.5


#NameIsotope labelingTypeConcentration
1CDT-LPSnatural abundance0.5 mM
2D2Onatural abundance100 %

Protein Blocks Logo
Calculated from 20 models in PDB: 2LM8, Strand ID: A Detail


Release date
2012-04-22
Citation
Structure, activity and interactions of the cysteine deleted analog of tachyplesin-1 with lipopolysaccharide micelle: Mechanistic insights into outer-membrane permeabilization and endotoxin neutralization
Saravanan, R., Mohanram, H., Joshi, M., Domadia, P.N., Torres, J., Ruedl, C., Bhattacharjya, S.
Biochim. Biophys. Acta (2012), 1818, 1613-1624, PubMed 22464970 , DOI 10.1016/j.bbamem.2012.03.015 ,
Related entities 1. Cysteine Deleted Analog of Tachyplesin-1, : 1 entities Detail
Experiments performed 2 experiments Detail
NMR combined restraints 3 contents Detail
Keywords CDT, LPS, NMR, trNOESY