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Solution NMR Structure of the mitochondrial inner membrane domain (residues 164-251), FtsH_ext, from the paraplegin-like protein AFGL32 from Homo sapiens, Northeast Structural Genomics Consortium Target HR6741A
Authors
Ramelot, T.A., Yang, Y., Lee, H., Janua, H., Kohan, E., Shastry, R., Acton, T.B., Xiao, R., Everett, J.K., Prestegard, J.H., Montelione, G.T., Kennedy, M.A.
Assembly
HR6741A
Entity
1. HR6741A (polymer, Thiol state: not present), 99 monomers, 11474.71 Da Detail

MGHHHHHHSH MKRSGREITW KDFVNNYLSK GVVDRLEVVN KRFVRVTFTP GKTPVDGQYV WFNIGSVDTF ERNLETLQQE LGIEGENRVP VVYIAESDG


Formula weight
11474.71 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 93.9 %, Completeness: 90.5 %, Completeness (bb): 90.5 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All90.5 % (1063 of 1174)90.8 % (553 of 609)89.7 % (411 of 458)92.5 % (99 of 107)
Backbone90.5 % (532 of 588)91.2 % (186 of 204)89.6 % (258 of 288)91.7 % (88 of 96)
Sidechain90.7 % (613 of 676)90.6 % (367 of 405)90.4 % (235 of 260)100.0 % (11 of 11)
Aromatic77.8 % (98 of 126)77.8 % (49 of 63)77.0 % (47 of 61)100.0 % (2 of 2)
Methyl100.0 % (102 of 102)100.0 % (51 of 51)100.0 % (51 of 51)

1. HR6741A

MGHHHHHHSH MKRSGREITW KDFVNNYLSK GVVDRLEVVN KRFVRVTFTP GKTPVDGQYV WFNIGSVDTF ERNLETLQQE LGIEGENRVP VVYIAESDG

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 0.7 mM [U-100% 13C; U-100% 15N] HR6741A, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1HR6741A[U-100% 13C; U-100% 15N]0.7 mM
2sodium chloridenatural abundance200 mM
3MESnatural abundance20 mM
4calcium chloridenatural abundance5 mM
5DTTnatural abundance10 mM
6DSSnatural abundance10 uM
7sodium azidenatural abundance0.02 %
8H2Onatural abundance90 %
9D2Onatural abundance10 %
Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 1.0 mM NC5 HR6741A, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
10HR6741ANC51.0 mM
11sodium chloridenatural abundance200 mM
12MESnatural abundance20 mM
13calcium chloridenatural abundance5 mM
14DTTnatural abundance10 mM
15DSSnatural abundance10 uM
16sodium azidenatural abundance0.02 %
17H2Onatural abundance90 %
18D2Onatural abundance10 %
Sample #3

Solvent system 100% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 0.7 mM [U-100% 13C; U-100% 15N] HR6741A, 100% D2O


#NameIsotope labelingTypeConcentration
19HR6741A[U-100% 13C; U-100% 15N]0.7 mM
20sodium chloridenatural abundance200 mM
21MESnatural abundance20 mM
22calcium chloridenatural abundance5 mM
23DTTnatural abundance10 mM
24DSSnatural abundance10 uM
25sodium azidenatural abundance0.02 %
26D2Onatural abundance100 %

LACS Plot; CA
Referencing offset: -0.08 ppm, Outliers: 3 Detail
LACS Plot; CB
Referencing offset: -0.08 ppm, Outliers: 3 Detail
LACS Plot; HA
Referencing offset: -0.06 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: 0.15 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2LNA, Strand ID: A Detail


Release date
2012-02-05
Related entities 1. HR6741A, : 1 : 4 : 41 entities Detail
Interaction partners 1. HR6741A, : 47 interactors Detail
Experiments performed 19 experiments Detail
NMR combined restraints 5 contents Detail
Keywords AFG3L2, AFG3-like gene 2, mitochondrial inner membrane protein, MPP, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), paraplegin-like, Protein NMR, Protein Structure Initiative, PSI-Biology, Structural Genomics, Target HR6741A