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Structure and orientation of the gH625-644 membrane interacting region of herpes simplex virus type 1 in a membrane mimetic system.
Authors
Isernia, C., Galdiero, S., Russo, L., Falanga, A., Cantisani, M., Vitiello, M., Fattorusso, R., Malgieri, G., Galdiero, M.
Assembly
gH625-644
Entity
1. gH625-644, entity 1 (polymer, Thiol state: not present), 20 monomers, 2298.603 Da Detail

HGLASTLTRW AHYNALIRAF


2. ACETYL GROUP (non-polymer), 44.053 Da
3. N'-{4-[2-(DIAMINOMETHYLIDENE)HYDRAZONO]CYCLOHEXYLIDEN}AMINOMETHANEHYDRAZONAMIDE (non-polymer), 224.266 Da
Total weight
2566.922 Da
Max. entity weight
2298.603 Da
Source organism
Human alphaherpesvirus 1
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 73.7 %, Completeness (bb): 95.1 % Detail

Polymer type: polypeptide(L)

Total1H
All73.7 % (87 of 118)73.7 % (87 of 118)
Backbone95.1 % (39 of 41)95.1 % (39 of 41)
Sidechain62.3 % (48 of 77)62.3 % (48 of 77)
Aromatic63.2 % (12 of 19)63.2 % (12 of 19)
Methyl64.3 % (9 of 14)64.3 % (9 of 14)

1. entity 1

HGLASTLTRW AHYNALIRAF

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 273 K, pH 6


#NameIsotope labelingTypeConcentration
1gH625-644natural abundance1 mM
2H2Onatural abundance90 %
3D2Onatural abundance10 %

Protein Blocks Logo
Calculated from 20 models in PDB: 2LQY, Strand ID: A Detail


Release date
2012-04-15
Citation
Structure and orientation of the gH625-644 membrane interacting region of herpes simplex virus type 1 in a membrane mimetic system
Galdiero, S., Russo, L., Falanga, A., Cantisani, M., Vitiello, M., Fattorusso, R., Malgieri, G., Galdiero, M., Isernia, C.
Biochemistry (2012), 51, 3121-3128, PubMed 22397737 , DOI 10.1021/bi201589m ,
Related entities 1. gH625-644, entity 1, : 1 : 3 : 2 entities Detail
Experiments performed 3 experiments Detail
NMR combined restraints 3 contents Detail
Keywords DPC, glycoprotein H, Herpes Simplex Virus type1