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Pleurocidin-NH2
Authors
Vermeer, L.S., Kozlowska, J., Mason, J.A.
Assembly
pleurocidin
Entity
1. pleurocidin (polymer, Thiol state: all free), 25 monomers, 2711.126 Da Detail

GWGSFFKKAA HVGKHVGKAA LTHYL


Formula weight
2711.126 Da
Exptl. method
solution NMR
Refine. method
simulated annealing, torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 80.0 %, Completeness (bb): 94.4 % Detail

Polymer type: polypeptide(L)

Total1H
All80.0 % (120 of 150)80.0 % (120 of 150)
Backbone94.4 % (51 of 54)94.4 % (51 of 54)
Sidechain71.9 % (69 of 96)71.9 % (69 of 96)
Aromatic26.9 % (7 of 26)26.9 % (7 of 26)
Methyl84.6 % (11 of 13)84.6 % (11 of 13)

1. pleurocidin

GWGSFFKKAA HVGKHVGKAA LTHYL

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.0, Details pH 7.0


#NameIsotope labelingTypeConcentration
1TRISnatural abundance5 mM
2pleurocidinnatural abundance1 mM
3SDS[U-2H]100 mM
4TSPnatural abundance0.05 %
5H2Onatural abundance90 %
6D2Onatural abundance10 %

Protein Blocks Logo
Calculated from 10 models in PDB: 2LS9, Strand ID: A Detail


Release date
2013-03-31
Citation
Antimicrobial Peptide Potency is Facilitated by Greater Conformational Flexibility when Binding to Gram-negative Bacterial Inner Membranes
Vermeer, L.S., Kozlowska, J., Lorenz, C.D., Mason, J.A.
Sci. Rep. (2016), 6, 37639-37639, PubMed 27874065 , DOI 10.1038/srep37639 ,
Related entities 1. pleurocidin, : 1 : 3 : 1 : 1 : 7 entities Detail
Experiments performed 2 experiments Detail
NMR combined restraints 3 contents Detail
Keywords antimicrobial peptide, pleurocidin