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BMRB: 18469

2LTD

Solution NMR Structure of apo YdbC from Lactococcus lactis, Northeast Structural Genomics Consortium (NESG) Target KR150

Authors

Rossi, P., Barbieri, C.M., Aramini, J.A., Bini, E., Lee, H., Janjua, H., Ciccosanti, C., Wang, H., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T.

Assembly

YdbC

Entity

1. YdbC (polymer, Thiol state: not present), 80 monomers, 9469.598 × 2 Da Detail

MADKLKFEII EELIVLSENA KGWRKELNRV SWNDAEPKYD IRTWSPDHEK MGKGITLSEE EFGVLLKELG NKLEHHHHHH

Total weight

18939.195 Da

Max. entity weight

9469.598 Da

Source organism

Lactococcus lactis

Exptl. method

solution NMR

Refine. method

molecular dynamics

Data set

assigned_chemical_shifts, spectral_peak_list

Chem. Shift Complete

Sequence coverage: 91.3 %, Completeness: 88.0 %, Completeness (bb): 88.4 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	88.0 % (864 of 982)	87.4 % (451 of 516)	88.7 % (338 of 381)	88.2 % (75 of 85)
Backbone	88.4 % (421 of 476)	87.1 % (142 of 163)	89.8 % (211 of 235)	87.2 % (68 of 78)
Sidechain	88.0 % (511 of 581)	87.5 % (309 of 353)	88.2 % (195 of 221)	100.0 % (7 of 7)
Aromatic	73.9 % (68 of 92)	73.9 % (34 of 46)	72.1 % (31 of 43)	100.0 % (3 of 3)
Methyl	100.0 % (78 of 78)	100.0 % (39 of 39)	100.0 % (39 of 39)

1. KR150

MADKLKFEII EELIVLSENA KGWRKELNRV SWNDAEPKYD IRTWSPDHEK MGKGITLSEE EFGVLLKELG NKLEHHHHHH

Show sample condition

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 0.697 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
8	KR150.020	[U-5% 13C; U-100% 15N]	0.697 mM
9	NaN3	natural abundance	0.02 %
10	DTT	natural abundance	10 mM
11	NaCL	natural abundance	100 mM
12	D2O	natural abundance	10 %
13	DSS	natural abundance	50 uM
14	TRIS-HCl	natural abundance	10 mM

Sample #3

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.2 mM 1:1 natural abundance:[U-15N,13C] PST ID KR150.019:KR150.020, 90% H2O/10% D2O for X-filtered

#	Name	Isotope labeling	Concentration
15	KR150.019	natural abundance	1.2 mM
16	NaN3	natural abundance	0.02 %
17	DTT	natural abundance	10 mM
18	NaCL	natural abundance	100 mM
19	D2O	natural abundance	10 %
20	DSS	natural abundance	50 uM
21	TRIS-HCl	natural abundance	10 mM

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: 0.24 ppm, Outliers: 1 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: 0.24 ppm, Outliers: 1 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: -0.11 ppm, Outliers: 1 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: 0.19 ppm, Outliers: 1 Detail

Protein Blocks Logo

Calculated from 20 models in PDB: 2LTD, Strand ID: A, B Detail

Release date

2012-06-03

Related entities 1. YdbC, : 1 : 1 : 7 entities Detail

Experiments performed 19 experiments Detail

1 2D 1H-15N HSQC

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

2 2D 1H-13C HSQC

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

3 3D HNCO

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

4 3D CBCA(CO)NH

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

5 3D HNCACB

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

6 3D 1H-13C arom NOESY

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

7 3D 1H-13C NOESY aliphatic

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

8 3D 1H-13C NOESY aromatic

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

9 3D 1H-15N NOESY

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

10 3D-X-filt-13C-editedNOESY

Instrument

Varian INOVA - 600 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.2 mM 1:1 natural abundance:[U-15N,13C] PST ID KR150.019:KR150.020, 90% H2O/10% D2O for X-filtered

#	Name	Isotope labeling	Concentration
15	KR150.019	natural abundance	1.2 mM
16	NaN3	natural abundance	0.02 %
17	DTT	natural abundance	10 mM
18	NaCL	natural abundance	100 mM
19	D2O	natural abundance	10 %
20	DSS	natural abundance	50 uM
21	TRIS-HCl	natural abundance	10 mM

11 3D HCCH-TOCSY

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

12 3D HBHA(CO)NH

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

13 3D HN(CA)CO

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

14 3D HCCH-COSY

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

15 3D CCH-TOCSY

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

16 1H-15N Hetnoe

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 0.697 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
8	KR150.020	[U-5% 13C; U-100% 15N]	0.697 mM
9	NaN3	natural abundance	0.02 %
10	DTT	natural abundance	10 mM
11	NaCL	natural abundance	100 mM
12	D2O	natural abundance	10 %
13	DSS	natural abundance	50 uM
14	TRIS-HCl	natural abundance	10 mM

17 1D T1

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

18 1D T2(cpmg)

Instrument

Bruker Avance - 800 MHz

Sample

State isotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 1.1 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	KR150.020	[U-100% 13C; U-100% 15N]	1.1 mM
2	NaN3	natural abundance	0.02 %
3	DTT	natural abundance	10 mM
4	NaCL	natural abundance	100 mM
5	D2O	natural abundance	10 %
6	DSS	natural abundance	50 uM
7	TRIS-HCl	natural abundance	10 mM

19 j-mod HSQC (rdc)

Instrument

Varian INOVA - 600 MHz

Sample

State anisotropic, Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 0.697 mM KR150.020, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
8	KR150.020	[U-5% 13C; U-100% 15N]	0.697 mM
9	NaN3	natural abundance	0.02 %
10	DTT	natural abundance	10 mM
11	NaCL	natural abundance	100 mM
12	D2O	natural abundance	10 %
13	DSS	natural abundance	50 uM
14	TRIS-HCl	natural abundance	10 mM

NMR combined restraints 7 contents Detail

Properties

Input source #1: NMR data (NEF) - Assigned chemical shifts, Distance restraints, Dihedral angle restraints, RDC restraints	combined_18469_2ltd.nef
Input source #2: Coordindates	2ltd.cif
Diamagnetism of the molecular assembly	True (excluding Oxygen atoms)
Whether the assembly has a disulfide bond	None
Whether the assembly has a other bond	None
Whether the assembly contains a cyclic polymer	None
Overall data processing status	Warning

Disulfide bonds

None

Other bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)

None

Non-standard residues

None

Sequence alignments

Entity_assembly_ID (NMR): A vs Auth_asym_ID (model): A

--------10--------20--------30--------40--------50--------60--------70--------80
MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEEEFGVLLKELGNKLEHHHHHH
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEEEFGVLLKELGNKLEHHHHHH

Entity_assembly_ID (NMR): B vs Auth_asym_ID (model): B

--------10--------20--------30--------40--------50--------60--------70--------80
MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEEEFGVLLKELGNKLEHHHHHH
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEEEFGVLLKELGNKLEHHHHHH

Chain assignments

Entity_assembly_ID (NMR)	Auth_asym_ID (model)	Length	Unmapped	Conflict	Sequence coverage (%)
A	A	80	0	0	100.0
B	B	80	0	0	100.0

Content subtype: combined_18469_2ltd.nef

#	Content subtype	Saveframe	Status	# of rows (sets)	Experiment type	Sequence coverage (%)
1	Assigned chemical shifts	assigned_chem_shift_list_1	Warning	873		91.2 (chain: A, length: 80)
1	Distance restraints	CNS/XPLOR_distance_constraints_2	OK	3726 (1)	noe	91.2 (chain: A, length: 80), 91.2 (chain: B, length: 80)
2	Distance restraints	CNS/XPLOR_distance_constraints_4	OK	130 (1)	hbond	50.0 (chain: A, length: 80), 50.0 (chain: B, length: 80)
1	Dihedral angle restraints	CNS/XPLOR_dihedral_3	OK	328 (328)	.	92.5 (chain: A, length: 80), 92.5 (chain: B, length: 80)
1	RDC restraints	CNS/XPLOR_dipolar_coupling_5	OK	116 (116)	.	70.0 (chain: A, length: 80), 70.0 (chain: B, length: 80)
2	RDC restraints	CNS/XPLOR_dipolar_coupling_6	OK	106 (106)	.	63.7 (chain: A, length: 80), 63.7 (chain: B, length: 80)

Assigned chemical shifts

Saveframe: assigned_chem_shift_list_1
- Status: Warning
- Sequence coverage of experimental data
  - Entity_assembly_ID: A, Chain length: 80, Sequence coverage: 91.2%
- Total number of assignments
  - ¹H chemical shifts: 458
  - ¹³C chemical shifts: 338
  - ¹⁵N chemical shifts: 77
- Completeness of assignments
  - Entity_assemble_ID: A
- Peptide bond of PRO
- Tautomeric state of HIS
- Rotameric state of ILE , LEU, and VAL
- Histogram of normalized assigned chemical shifts
- Random coil index and derived parameters (S² and NMR RMSD)
  - Chain_ID: A

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	516	458	88.8
¹³C chemical shifts	381	338	88.7
¹⁵N chemical shifts	88	77	87.5

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	163	146	89.6
¹³C chemical shifts	160	143	89.4
¹⁵N chemical shifts	78	68	87.2

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	353	312	88.4
¹³C chemical shifts	221	195	88.2
¹⁵N chemical shifts	10	9	90.0

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	41	40	97.6
¹³C chemical shifts	41	40	97.6

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	46	34	73.9
¹³C chemical shifts	43	31	72.1
¹⁵N chemical shifts	3	3	100.0

Distance restraints

Saveframe: CNS/XPLOR_distance_constraints_2
- Status: OK
- Experiment type: noe
- Sequence coverage of experimental data
  - Entity_assembly_ID: A, Chain length: 80, Sequence coverage: 91.2%
  - Entity_assembly_ID: B, Chain length: 80, Sequence coverage: 91.2%
- Total number of restraints: 3723
- Weight of restraints: 1.0 (3723)
- Potential type of restraints: square-well-parabolic (3723)
- Range of distance target values: 2.23, 4.35 (Å)
- Histogram of distance target values
- Histogram of discrepancy in distance target values
- Distance restraints per residue
  - Chain_ID: A
  - Chain_ID: B
- Distance restraints on contact map
- Saveframe: CNS/XPLOR_distance_constraints_4
  - Status: OK
  - Experiment type: hbond
  - Sequence coverage of experimental data
    - Entity_assembly_ID: A, Chain length: 80, Sequence coverage: 50.0%
    - Entity_assembly_ID: B, Chain length: 80, Sequence coverage: 50.0%
  - Total number of restraints: 130
  - Weight of restraints: 1.0 (130)
  - Potential type of restraints: square-well-parabolic (130)
  - Range of distance target values: 1.93, 3.15 (Å)
  - Histogram of distance target values
  - Distance restraints per residue
    - Chain_ID: A
    - Chain_ID: B
  - Distance restraints on contact map

Dihedral angle restraints

Saveframe: CNS/XPLOR_dihedral_3
- Status: OK
- Experiment type: .
- Sequence coverage of experimental data
  - Entity_assembly_ID: A, Chain length: 80, Sequence coverage: 92.5%
  - Entity_assembly_ID: B, Chain length: 80, Sequence coverage: 92.5%
- Total number of restraints: 328
- Total number of restraints per polymer type: 328
- Weight of restraints: 1.0 (328)
- Potential type of restraints: square-well-parabolic (328)
- Plot of Phi-Psi angle restraints
- Plot of Chi1-Chi2 angle restraints
- Dihedral angle restraints per residue
  - Chain_ID: A
  - Chain_ID: B

RDC restraints

Saveframe: CNS/XPLOR_dipolar_coupling_5

Status: OK
Experiment type: .

Sequence coverage of experimental data

Entity_assembly_ID: A, Chain length: 80, Sequence coverage: 70.0%

--------10--------20--------30--------40--------50--------60--------70--------80
MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEEEFGVLLKELGNKLEHHHHHH
   ||||||||||||||||  ||| ||||||||||| ||||||||  ||  | ||||||| || ||   |||       |
...KLKFEIIEELIVLSEN..GWR.ELNRVSWNDAE.KYDIRTWS..HE..G.GITLSEE.FG.LL...GNK.......H

Entity_assembly_ID: B, Chain length: 80, Sequence coverage: 70.0%

--------10--------20--------30--------40--------50--------60--------70--------80
MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEEEFGVLLKELGNKLEHHHHHH
   ||||||||||||||||  ||| ||||||||||| ||||||||  ||  | ||||||| || ||   |||       |
...KLKFEIIEELIVLSEN..GWR.ELNRVSWNDAE.KYDIRTWS..HE..G.GITLSEE.FG.LL...GNK.......H

Total number of restraints: 116
Potential type of restraints: undefined (116)
Range of observed RDC values: 100.0, -100.0 (Hz)
RDC restraints per residue
- Chain_ID: A
  None
- Chain_ID: B
  None

Saveframe: CNS/XPLOR_dipolar_coupling_6

Status: OK
Experiment type: .

Sequence coverage of experimental data

Entity_assembly_ID: A, Chain length: 80, Sequence coverage: 63.7%

--------10--------20--------30--------40--------50--------60--------70--------80
MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEEEFGVLLKELGNKLEHHHHHH
   |  ||| ||||  ||| ||||  |||||||||| ||||||||   ||   ||||||| || ||    | |||    |
...K..FEI.EELI..SEN.KGWR..LNRVSWNDAE.KYDIRTWS...EK...GITLSEE.FG.LL....N.LEH....H

Entity_assembly_ID: B, Chain length: 80, Sequence coverage: 63.7%

--------10--------20--------30--------40--------50--------60--------70--------80
MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEEEFGVLLKELGNKLEHHHHHH
   |  ||| ||||  ||| ||||  |||||||||| ||||||||   ||   ||||||| || ||    | |||    |
...K..FEI.EELI..SEN.KGWR..LNRVSWNDAE.KYDIRTWS...EK...GITLSEE.FG.LL....N.LEH....H

Total number of restraints: 106
Potential type of restraints: undefined (106)
Range of observed RDC values: 100.0, -100.0 (Hz)
RDC restraints per residue
- Chain_ID: A
  None
- Chain_ID: B
  None

Keywords NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), PSI-Biology, Protein NMR, Protein Structure Initiative, Structural Genomics, Target KR150

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Found 1 Document (0.592 seconds)

BMRB: 18469

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Chemical shift reference

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Related entities 1. YdbC, : 1 : 1 : 7 entities Detail

Experiments performed 19 experiments Detail

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NMR combined restraints 7 contents Detail