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Structure of N-terminal domain of a plant Grx
Authors
Feng, Y.
Assembly
N-terminal domain of a plant Grx
Entity
1. N-terminal domain of a plant Grx (polymer, Thiol state: all free), 119 monomers, 12888.48 Da Detail

MASAVKSLTE TELLPITEAD SIPSASGVYA VYDKSDELQF VGISRNIAAS VSAHLKSVPE LCGSVKVGIV EEPDKAVLTQ AWKLWIEEHI KVTGKVPPGN KSGNNTFVKV TLEHHHHHH


Formula weight
12888.48 Da
Source organism
Arabidopsis thaliana
Exptl. method
solution NMR
Refine. method
molecular dynamics, simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 94.1 %, Completeness: 90.7 %, Completeness (bb): 91.6 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All90.7 % (1220 of 1345)90.9 % (626 of 689)90.3 % (483 of 535)91.7 % (111 of 121)
Backbone91.6 % (643 of 702)92.5 % (221 of 239)91.1 % (319 of 350)91.2 % (103 of 113)
Sidechain90.3 % (682 of 755)90.0 % (405 of 450)90.6 % (269 of 297)100.0 % (8 of 8)
Aromatic71.7 % (66 of 92)71.7 % (33 of 46)70.5 % (31 of 44)100.0 % (2 of 2)
Methyl96.8 % (149 of 154)96.1 % (74 of 77)97.4 % (75 of 77)

1. N-terminal domain of a plant Grx

MASAVKSLTE TELLPITEAD SIPSASGVYA VYDKSDELQF VGISRNIAAS VSAHLKSVPE LCGSVKVGIV EEPDKAVLTQ AWKLWIEEHI KVTGKVPPGN KSGNNTFVKV TLEHHHHHH

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7


#NameIsotope labelingTypeConcentration
1Nterm_Grx[U-13C; U-15N]0.5-1.0 mM
2sodium phosphatenatural abundance50 mM
3DTTnatural abundance10 mM
4DSSnatural abundance0.02 %
5D2O[U-2H]0.1 v/v
6H2Onatural abundance90 %

LACS Plot; CA
Referencing offset: -0.24 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.24 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.04 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: 0.09 ppm, Outliers: 1 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2LWF, Strand ID: A Detail


Release date
2013-05-19
Citation
Solution structure of N-terminal domain of a plant glutaredoxin
Liu, X., Liu, S., Feng, Y., Liu, J., Avery, C., Deng, H., Hirschi, K.D., Wang, X., Cheng, N.
Not known
Related entities 1. N-terminal domain of a plant Grx, : 1 : 7 entities Detail
Interaction partners 1. N-terminal domain of a plant Grx, : 7 interactors Detail
Experiments performed 14 experiments Detail
NMR combined restraints 10 contents Detail
Keywords Nuclease