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BMRB: 18805

2M0C

Solution NMR Structure of Homeobox Domain of Human ALX4, Northeast Structural Genomics Consortium (NESG) Target HR4490C

Authors

Xu, X., Eletsky, A., Pulavarti, S., Lee, D., Janjua, H., Xiao, R., Acton, T.B., Everett, J.K., Montelione, G.T., Szyperski, T.

Assembly

HR4490C

Entity

1. HR4490C (polymer, Thiol state: not present), 75 monomers, 9336.495 Da Detail

SHMSNKGKKR RNRTTFTSYQ LEELEKVFQK THYPDVYARE QLAMRTDLTE ARVQVWFQNR RAKWRKRERF GQMQQ

Formula weight

9336.495 Da

Source organism

Homo sapiens

Exptl. method

solution NMR

Refine. method

simulated annealing

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 73.3 %, Completeness: 69.9 %, Completeness (bb): 71.0 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	69.9 % (674 of 964)	68.7 % (355 of 517)	71.9 % (259 of 360)	69.0 % (60 of 87)
Backbone	71.0 % (318 of 448)	67.5 % (102 of 151)	73.5 % (164 of 223)	70.3 % (52 of 74)
Sidechain	69.8 % (411 of 589)	69.1 % (253 of 366)	71.4 % (150 of 210)	61.5 % (8 of 13)
Aromatic	81.3 % (78 of 96)	95.8 % (46 of 48)	65.2 % (30 of 46)	100.0 % (2 of 2)
Methyl	90.4 % (47 of 52)	88.5 % (23 of 26)	92.3 % (24 of 26)

1. HR4490C

SHMSNKGKKR RNRTTFTSYQ LEELEKVFQK THYPDVYARE QLAMRTDLTE ARVQVWFQNR RAKWRKRERF GQMQQ

Show sample condition

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 0.9mM HR4490C, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
1	HR4490C	[U-100% 13C; U-100% 15N]	0.871 mM
2	sodium chloride	natural abundance	100 mM
3	DTT	natural abundance	5 mM
4	sodium azide	natural abundance	0.02 %
5	Tris-HCl	natural abundance	10 mM
6	DSS	natural abundance	50 uM
7	H2O	natural abundance	90 %
8	D2O	natural abundance	10 %

Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.5, Details 0.6 mM HR4490C, 90% H2O/10% D2O

#	Name	Isotope labeling	Concentration
9	HR4490C	[5% 13C; U-100% 15N]	0.6 mM
10	sodium chloride	natural abundance	100 mM
11	DTT	natural abundance	5 mM
12	sodium azide	natural abundance	0.02 %
13	Tris-HCl	natural abundance	10 mM
14	DSS	natural abundance	50 uM
15	H2O	natural abundance	90 %
16	D2O	natural abundance	10 %

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: -0.19 ppm, Outliers: 1 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: -0.19 ppm, Outliers: 1 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: 0.08 ppm, Outliers: 1 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: -0.84 ppm, Outliers: 3 Detail

Protein Blocks Logo

Calculated from 20 models in PDB: 2M0C, Strand ID: A Detail

Release date

2012-11-20

Related entities 1. HR4490C, : 1 : 6 : 216 entities Detail

Interaction partners 1. HR4490C, : 3 interactors Detail

More details for 3 interactors identified by 1 citations

Experiments performed 14 experiments Detail

1 2D 1H-15N HSQC