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BMRB: 18917

2M2J

Solution NMR structure of the N-terminal domain of STM1478 from Salmonella typhimurium LT2: Target STR147A of the Northeast Structural Genomics consortium (NESG), and APC101565 of the Midwest Center for Structural Genomics (MCSG).

Authors

Houliston, S., Yee, A., Lemak, A., Garcia, M., Wu, B., Savchenko, A., Arrowsmith, C.

Assembly

tstm1395

Entity

1. tstm1395 (polymer, Thiol state: not present), 92 monomers, 10027.79 Da Detail

MGSSHHHHHH SSGRENLYFQ GHAATELTPE QAAALKPYDR IVITGRFNAI GDAVSAVSRR ADEEGAASFY VVDTSEFGNS GNWRVVADVY KA

Formula weight

10027.79 Da

Source organism

Salmonella enterica subsp. enterica serovar Typhimurium

Exptl. method

solution NMR

Refine. method

restrained molecular dynamics

Data set

assigned_chemical_shifts, spectral_peak_list

Chem. Shift Complete

Sequence coverage: 80.4 %, Completeness: 72.3 %, Completeness (bb): 74.8 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	72.3 % (722 of 998)	73.2 % (372 of 508)	70.7 % (278 of 393)	74.2 % (72 of 97)
Backbone	74.8 % (410 of 548)	74.7 % (142 of 190)	75.0 % (201 of 268)	74.4 % (67 of 90)
Sidechain	70.8 % (378 of 534)	72.3 % (230 of 318)	68.4 % (143 of 209)	71.4 % (5 of 7)
Aromatic	42.9 % (48 of 112)	50.0 % (28 of 56)	34.5 % (19 of 55)	100.0 % (1 of 1)
Methyl	86.7 % (78 of 90)	86.7 % (39 of 45)	86.7 % (39 of 45)

1. entity

MGSSHHHHHH SSGRENLYFQ GHAATELTPE QAAALKPYDR IVITGRFNAI GDAVSAVSRR ADEEGAASFY VVDTSEFGNS GNWRVVADVY KA

Show sample condition

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5

#	Name	Isotope labeling	Concentration
1	entity	[U-13C; U-15N]	0.5 mM
2	BIS-TRIS	natural abundance	10 mM
3	sodium chloride	natural abundance	200 mM
4	ZnSO4	natural abundance	10 uM
5	DTT	natural abundance	10 mM
6	benzamidine	natural abundance	1 mM

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: -0.29 ppm, Outliers: 3 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: -0.29 ppm, Outliers: 3 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: 0.04 ppm, Outliers: 2 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: 0.02 ppm, Outliers: 1 Detail

Protein Blocks Logo

Calculated from 20 models in PDB: 2M2J, Strand ID: A Detail

Release date

2013-02-14

Citation

NMR solution structure of the N-terminal STM1478, from Salmonella typhimurium LT2
Houliston, S., Yee, A., Lemak, A., Garcia, M., Wu, B., Savchenko, A., Arrowsmith, C.
Not known

Related entities 1. tstm1395, : 1 : 2 entities Detail

Experiments performed 9 experiments Detail

1 3D HNCO