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Solution NMR Structure of Zinc finger protein 423 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR7298F
Authors
Lee, D., Kohan, E., Pederson, K., Janjua, H., Xiao, R., Everett, J.K., Acton, T.B., Montelione, G.T., Prestegard, J.H.
Assembly
Hr7298f
Entity
1. HR7298F (polymer, Thiol state: all other bound), 55 monomers, 6324.219 Da Detail

MGSHKCNVCS RTFFSENGLR EHLQTHRGPA KHYMCPICGE RFPSLLTLTE HKVTH


2. ZINC ION (non-polymer), 65.409 × 2 Da
Total weight
6455.037 Da
Max. entity weight
6324.219 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 86.7 %, Completeness (bb): 98.1 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All86.7 % (556 of 641)86.9 % (291 of 335)85.3 % (214 of 251)92.7 % (51 of 55)
Backbone98.1 % (318 of 324)99.1 % (110 of 111)97.5 % (157 of 161)98.1 % (51 of 52)
Sidechain78.5 % (289 of 368)80.8 % (181 of 224)76.6 % (108 of 141) 0.0 % (0 of 3)
Aromatic 0.0 % (0 of 62) 0.0 % (0 of 31) 0.0 % (0 of 31)
Methyl100.0 % (44 of 44)100.0 % (22 of 22)100.0 % (22 of 22)

1. HR7298F

MGSHKCNVCS RTFFSENGLR EHLQTHRGPA KHYMCPICGE RFPSLLTLTE HKVTH

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 0.17 mM HR7298F.005, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1HR7298F.005[U-100% 13C; U-100% 15N]0.17 mM
2NaN3natural abundance0.02 %
3DTTnatural abundance10 mM
4CaCL2natural abundance5 mM
5NaCLnatural abundance100 mM
6Proteinase Inhibitorsnatural abundance1 na
7MES pH 6.5natural abundance20 mM
8D2O[U-100% 2H]10 %
9DSSnatural abundance50 uM
10ZnSO4natural abundance50 uM
11H2Onatural abundance90 %
Sample #2

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details C12E5 solution for RDC


#NameIsotope labelingTypeConcentration
12HR7298F.0059[U-5% 13C; U-100% 15N]0.51 mM
13NaN3natural abundance0.02 %
14DTTnatural abundance10 mM
15CaCL2natural abundance5 mM
16NaCLnatural abundance100 mM
17Proteinase Inhibitorsnatural abundance1 na
18MES pH 6.5natural abundance20 mM
19D2O[U-100% 2H]5 %
20DSSnatural abundance50 uM
21C12E5 PEG/Hexanolnatural abundance4.2 %
22ZnSO4natural abundance50 uM
23H2Onatural abundance95 %
Sample #3

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 0.51 mM HR7298F.009, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
24HR7298F.009[U-5% 13C; U-100% 15N]0.51 mM
25NaN3natural abundance0.02 %
26DTTnatural abundance10 mM
27CaCL2natural abundance5 mM
28NaCLnatural abundance100 mM
29Proteinase Inhibitorsnatural abundance1 na
30MES pH 6.5natural abundance20 mM
31D2O[U-100% 2H]5 %
32DSSnatural abundance50 uM
33ZnSO4natural abundance50 uM
34H2Onatural abundance95 %
Sample #4

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details PEG/hexanol NC sample for RDCs


#NameIsotope labelingTypeConcentration
35HR7298F.005[U-100% 13C; U-100% 15N]0.17 mM
36NaN3natural abundance0.02 %
37DTTnatural abundance10 mM
38CaCL2natural abundance5 mM
39NaCLnatural abundance100 mM
40Proteinase Inhibitorsnatural abundance1 na
41MES pH 6.5natural abundance20 mM
42D2O[U-100% 2H]10 %
43DSSnatural abundance50 uM
44ZnSO4natural abundance50 uM
45C12E5 PEG?Hexanolnatural abundance4.2 %
46H2Onatural abundance90 %

LACS Plot; CA
Referencing offset: -0.33 ppm, Outliers: 5 Detail
LACS Plot; CB
Referencing offset: -0.33 ppm, Outliers: 5 Detail
LACS Plot; HA
Referencing offset: 0.13 ppm, Outliers: 3 Detail
LACS Plot; CO
Referencing offset: 1.61 ppm, Outliers: 1 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2MDG, Strand ID: A Detail


Release date
2013-09-22
Related entities 1. HR7298F, : 1 : 6 : 1848 entities Detail
Interaction partners 1. HR7298F, : 9 interactors Detail
Experiments performed 14 experiments Detail
NMR combined restraints 4 contents Detail
Keywords C2H2, Hr7298F, PSI:Biology, Zinc, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), Protein NMR, Protein Structure Initiative, PSI-Biology, Structural Genomics, Target HR7298F