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Solution structure of the CLAVATA encoded peptide of Arabidopsis thaliana - AtCLE44
Authors
Bobay, B.G., DiGennaro, P.M., Bird, D.MCK.
Assembly
CLAVATA encoded peptide of Arabidopsis thaliana - AtCLE44
Entity
1. CLAVATA encoded peptide of Arabidopsis thaliana - AtCLE44 (polymer, Thiol state: not present), 12 monomers, 1247.313 Da Detail

HEVPSGPNPI SN


Formula weight
1247.313 Da
Source organism
Arabidopsis thaliana
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 77.3 %, Completeness (bb): 71.2 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All77.3 % (99 of 128)88.2 % (60 of 68)59.2 % (29 of 49)90.9 % (10 of 11)
Backbone71.2 % (47 of 66)100.0 % (22 of 22)48.6 % (17 of 35)88.9 % (8 of 9)
Sidechain82.2 % (60 of 73)82.6 % (38 of 46)80.0 % (20 of 25)100.0 % (2 of 2)
Aromatic 0.0 % (0 of 4) 0.0 % (0 of 2) 0.0 % (0 of 2)
Methyl100.0 % (8 of 8)100.0 % (4 of 4)100.0 % (4 of 4)

1. entity

HEVPSGPNPI SN

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 273 K, pH 7.0 (±0.1)


#NameIsotope labelingTypeConcentration
1entitynatural abundance4 mg/mL
2potassium chloridenatural abundance2.7 mM
3potassium phosphatenatural abundance1.8 mM
4sodium chloridenatural abundance137 mM
5sodium phosphatenatural abundance10 mM
6H2Onatural abundance90 %
7D2Onatural abundance10 %

Protein Blocks Logo
Calculated from 10 models in PDB: 2MIE, Strand ID: A Detail


Release date
2014-12-21
Citation
Inferring function of CLE peptides from high resolution tertiary structures
DiGennaro, P.M., Bobay, B.G., Bird, D.MCK.
Proc. Natl. Acad. Sci. U.S.A.
Related entities 1. CLAVATA encoded peptide of Arabidopsis thaliana - AtCLE44, : 1 : 11 : 1 : 8 : 3 entities Detail
Interaction partners 1. CLAVATA encoded peptide of Arabidopsis thaliana - AtCLE44, : 1 interactors Detail
Experiments performed 4 experiments Detail
NMR combined restraints 3 contents Detail
Keywords Arabidopsis thaliana, CLAVATA, CLE, Meloidogyne, peptide