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Solution structure of the CLAVATA-like encoded peptide of Meloidogyne hapla - MhCLE4
Authors
Bobay, B.G., DiGennaro, P.M., Bird, D.MCK.
Assembly
CLAVATA-like encoded peptide of Meloidogyne hapla - MhCLE4
Entity
1. CLAVATA-like encoded peptide of Meloidogyne hapla - MhCLE4 (polymer, Thiol state: not present), 12 monomers, 1221.233 Da Detail

HEVPSGPNPS SN


Formula weight
1221.233 Da
Source organism
Meloidogyne hapla
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 71.3 %, Completeness (bb): 72.7 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All71.3 % (87 of 122)81.5 % (53 of 65)50.0 % (23 of 46)100.0 % (11 of 11)
Backbone72.7 % (48 of 66)100.0 % (22 of 22)48.6 % (17 of 35)100.0 % (9 of 9)
Sidechain68.7 % (46 of 67)72.1 % (31 of 43)59.1 % (13 of 22)100.0 % (2 of 2)
Aromatic 0.0 % (0 of 4) 0.0 % (0 of 2) 0.0 % (0 of 2)
Methyl100.0 % (4 of 4)100.0 % (2 of 2)100.0 % (2 of 2)

1. entity

HEVPSGPNPS SN

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 273 K, pH 7.0 (±0.1)


#NameIsotope labelingTypeConcentration
1entitynatural abundance4 mg/mL
2sodium chloridenatural abundance137 mM
3potassium chloridenatural abundance2.7 mM
4sodium phosphatenatural abundance10 mM
5potassium phosphatenatural abundance1.8 mM
6H2Onatural abundance90 %
7D2Onatural abundance10 %

Protein Blocks Logo
Calculated from 10 models in PDB: 2MIF, Strand ID: A Detail


Release date
2014-12-21
Citation
Inferring function of CLE peptides from high resolution tertiary structures
DiGennaro, P.M., Bobay, B.G., Bird, D.MCK.
Proc. Natl. Acad. Sci. U.S.A.
Related entities 1. CLAVATA-like encoded peptide of Meloidogyne hapla - MhCLE4, : 1 : 15 : 3 entities Detail
Interaction partners 1. CLAVATA-like encoded peptide of Meloidogyne hapla - MhCLE4, : 1 interactors Detail
Experiments performed 4 experiments Detail
NMR combined restraints 3 contents Detail
Keywords Arabidopsis thaliana, CLAVATA, CLE, Meloidogyne, peptide