BMRB: 19745

Solution NMR structure of a mismatch DNA

Authors

Ghosh, A., Kar, R.KUMAR., Bhunia, A., Chatterjee, S.

Assembly

DNA (28-MER)

Entity

1. DNA (28-MER) 1 (polymer, Thiol state: not present), 14 monomers, 4344.751 Da Detail

GCGCATGCTA CGCG

2. DNA (28-MER) 2 (polymer, Thiol state: not present), 14 monomers, 4344.751 Da Detail

CGCGTACGAT GCGC

Total weight

8689.502 Da

Max. entity weight

4344.751 Da

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 73.2 %, Completeness (bb): 71.4 % Detail

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Polymer type: polydeoxyribonucleotide

	Total	1H
All	73.2 % (202 of 276)	73.2 % (202 of 276)
Suger, PO4	71.4 % (140 of 196)	71.4 % (140 of 196)
Nucleobase	77.5 % (62 of 80)	77.5 % (62 of 80)
Aromatic	82.1 % (46 of 56)	82.1 % (46 of 56)
Methyl	100.0 % (4 of 4)	100.0 % (4 of 4)

1. DNA (28-MER) 1

GCGCATGCTA CGCG

2. DNA (28-MER) 2

CGCGTACGAT GCGC

Show sample condition

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.2

#	Name	Isotope labeling	Type	Concentration
1	DNA (28-MER) 1	natural abundance		1 mM
2	D2O	natural abundance		90 %
3	H2O	natural abundance		10 %
4	DNA (28-MER) 2	natural abundance		1 mM

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Release date

2014-03-02

Citation

Solution NMR structure of mismatch DNA
Ghosh, A., Kar, R.KUMAR., Chatterjee, S., Bhunia, A.
Not known

Experiments performed 1 experiments Detail