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Structural model of tandem RRM domains of cytoplasmic polyadenylation element binding protein 1 (CPEB1) in complex with RNA
Authors
Afroz, T., Skrisovska, L., Belloc, E., Boixet, J.G., Mendez, R., Allain, F.H.-T.
Assembly
CPEB1RRM12 in complex with RNA
Entity
1. CPEB1RRM12 (polymer, Thiol state: all free), 213 monomers, 23899.28 Da Detail

MTWSGQLPPR NYKNPIYSCK VFLGGVPWDI TEAGLVNTFR VFGSLSVEWP GKDGKHPRCP PKGYVYLVFE LEKSVRSLLQ ACSHDPLSPD GLSEYYFKMS SRRMRCKEVQ VIPWVLADSN FVRSPSQRLD PSRTVFVGAL HGMLNAEALA AILNDLFGGV VYAGIDTDKH KYPIGSGRVT FNNQRSYLKA VSAAFVEIKT TKFTKKVQID PYL


2. 5'-UUUUA-3' (polymer), 5 monomers, 1571.884 Da Detail

UUUUA


Total weight
25471.164 Da
Max. entity weight
23899.28 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chemcal Shifts
1H: 896, 13C: 373, 15N: 194 assignments Detail
IDEntity IDSeq IDComp IDAtom IDAtom typeValVal errAmbig. code
112THRHH8.4210.003
212THRHAH5.3840.002
312THRHBH3.9760.001
412THRHG21H1.1560.002
512THRHG22H1.1560.002
612THRHG23H1.1560.002
712THRCAC58.2690.000
812THRCBC68.8060.000
912THRCG2C18.5060.000
1012THRNN118.3340.014
1113TRPHH9.1330.006
1213TRPHAH3.9960.003
1313TRPHD1H7.1210.004
1413TRPHE1H11.7150.007
1513TRPHE3H7.2660.003
1613TRPHZ2H7.2670.000
1713TRPHZ3H6.4520.009
1813TRPHH2H6.6170.002
1913TRPCAC55.0000.000
2013TRPCD1C127.3340.000
2113TRPCE3C120.5410.000
2213TRPCZ2C114.6620.000
2313TRPCZ3C121.3720.000
2413TRPCH2C123.9810.000
2513TRPNN127.3820.007
2613TRPNE1N134.0480.073
2714SERHH7.6180.006
2814SERHAH5.1200.006
2914SERHB2H3.4390.001
3014SERHB3H3.4390.001
3114SERCAC52.9000.000
3214SERCBC61.9270.000
3314SERNN122.7920.033
3415GLYHH6.1470.001
3515GLYHA2H3.5700.002
3615GLYHA3H3.0670.005
3715GLYCAC42.1520.000
3815GLYNN110.6430.026
3916GLNHH8.1620.002
4016GLNHAH4.3410.004
4116GLNHB2H1.9820.001
4216GLNHB3H1.8560.007
4316GLNHG2H2.3200.000
4416GLNHG3H2.3200.000
4516GLNHE21H7.4660.000
4616GLNHE22H6.7440.003
4716GLNCAC51.7220.000
4816GLNCBC27.5350.000
4916GLNCGC30.8480.000
5016GLNNN120.0480.000
5116GLNNE2N112.7760.000
5217LEUHH8.6650.002
5317LEUHAH4.4820.003
5417LEUHGH1.9050.003
5517LEUHD11H0.8020.001
5617LEUHD12H0.8020.001
5717LEUHD13H0.8020.001
5817LEUHD21H0.9960.003
5917LEUHD22H0.9960.003
6017LEUHD23H0.9960.003
6117LEUCAC50.4050.000
6217LEUCGC23.8400.000
6317LEUCD1C20.0000.000
6417LEUCD2C22.8920.000
6517LEUNN125.2620.004
6619PROHAH4.3290.004
6719PROHB2H2.2390.007
6819PROHB3H1.7600.008
6919PROCAC59.7600.000
7019PROCBC29.4490.000
71110ARGHH8.3600.003
72110ARGHB2H1.7010.004
73110ARGHB3H1.7010.004
74110ARGHD2H3.2770.001
75110ARGHD3H3.1850.003
76110ARGCBC27.3820.000
77110ARGCDC40.7370.000
78110ARGNN122.6980.000
79110ARGNH1N87.4860.000
80111ASNHH8.0790.005
81111ASNHB2H2.6150.002
82111ASNHB3H2.4790.000
83111ASNHD21H7.4440.001
84111ASNHD22H6.6890.000
85111ASNCBC36.6480.013
86111ASNNN121.9500.050
87111ASNND2N112.9600.027
88112TYRHH8.0970.001
89112TYRHD1H7.0430.001
90112TYRHD2H7.0430.001
91112TYRHE1H6.8140.000
92112TYRHE2H6.8140.000
93112TYRCD1C132.9660.000
94112TYRCE1C118.5990.000
95112TYRNN122.4450.000
96115PROHAH4.0580.011
97115PROCAC60.2500.000
98116ILEHH7.1550.005
99116ILEHAH3.9120.001
100116ILEHBH1.5790.009
101116ILEHG12H1.4720.006
102116ILEHG13H1.0880.007
103116ILEHG21H0.9190.001
104116ILEHG22H0.9190.001
105116ILEHG23H0.9190.001
106116ILEHD11H0.7970.000
107116ILEHD12H0.7970.000
108116ILEHD13H0.7970.000
109116ILECAC57.6220.000
110116ILECBC36.4810.000
111116ILECG1C24.3300.000
112116ILECG2C14.6990.000
113116ILECD1C9.5100.000
114116ILENN121.7860.041
115117TYRHH9.2240.003
116117TYRHAH5.2360.002
117117TYRHD1H6.9010.009
118117TYRHD2H6.9010.009
119117TYRHE1H6.3220.000
120117TYRHE2H6.3220.000
121117TYRCAC55.4300.000
122117TYRCD1C133.1340.000
123117TYRCE1C117.2460.000
124117TYRNN127.3560.034
125118SERHH8.8770.003
126118SERNN112.2710.000
127119CYSHH8.9480.001
128119CYSHAH4.2480.015
129119CYSHB2H2.8650.001
130119CYSHB3H2.8650.001
131119CYSCAC59.6700.000
132119CYSCBC25.0620.000
133119CYSNN124.8580.009
134120LYSHH8.3630.004
135120LYSHAH4.1490.008
136120LYSCAC52.1650.000
137120LYSNN123.2480.000
138121VALHH9.0800.004
139121VALHG11H0.8470.002
140121VALHG12H0.8470.002
141121VALHG13H0.8470.002
142121VALHG21H0.7110.000
143121VALHG22H0.7110.000
144121VALHG23H0.7110.000
145121VALCG1C19.0220.000
146121VALCG2C18.6650.000
147121VALNN124.1320.032
148122PHEHH7.5750.001
149122PHEHD1H6.5600.008
150122PHEHD2H6.5600.008
151122PHECD1C131.2760.000
152122PHENN126.8340.052
153123LEUHH7.9900.005
154123LEUHAH5.0820.001
155123LEUHB2H1.0490.006
156123LEUHB3H0.9620.010
157123LEUHD11H0.4560.023
158123LEUHD12H0.4560.023
159123LEUHD13H0.4560.023
160123LEUCAC49.5300.000
161123LEUCBC41.3770.035
162123LEUCD1C22.2000.800
163123LEUNN128.6600.045
164124GLYHH8.9980.002
165124GLYHA2H3.1590.000
166124GLYHA3H3.1590.000
167124GLYCAC42.1020.000
168124GLYNN108.7010.023
169125GLYHH8.1490.001
170125GLYNN114.2000.000
171126VALHH7.1850.001
172126VALHG11H0.7660.006
173126VALHG12H0.7660.006
174126VALHG13H0.7660.006
175126VALCG1C19.7400.000
176126VALNN114.0960.000
177128TRPHH7.8410.015
178128TRPHD1H7.2650.001
179128TRPHE1H10.0230.001
180128TRPHE3H7.4260.000
181128TRPHZ2H7.3510.002
182128TRPHZ3H7.0400.006
183128TRPHH2H7.1350.000
184128TRPCD1C127.0730.000
185128TRPCE3C121.1590.000
186128TRPCZ2C114.5400.000
187128TRPCZ3C122.0560.000
188128TRPCH2C124.7250.000
189128TRPNN122.0000.000
190128TRPNE1N130.2790.000
191129ASPHH8.1750.001
192129ASPNN115.7290.029
193130ILEHH7.1830.003
194130ILEHAH4.1730.002
195130ILEHG21H0.6030.000
196130ILEHG22H0.6030.000
197130ILEHG23H0.6030.000
198130ILEHD11H0.8770.004
199130ILEHD12H0.8770.004
200130ILEHD13H0.8770.004
201130ILECAC56.3900.000
202130ILECG2C15.8660.000
203130ILECD1C12.1300.000
204130ILENN123.2270.052
205131THRHH7.0810.002
206131THRHG21H1.2610.005
207131THRHG22H1.2610.005
208131THRHG23H1.2610.005
209131THRCG2C18.7880.000
210131THRNN111.8240.012
211132GLUHH9.3880.003
212132GLUNN122.5680.048
213133ALAHH8.5530.001
214133ALAHAH4.1140.002
215133ALAHB1H1.3980.000
216133ALAHB2H1.3980.000
217133ALAHB3H1.3980.000
218133ALACAC52.1600.000
219133ALACBC15.2320.000
220133ALANN120.0030.000
221134GLYHH7.8760.002
222134GLYNN106.7160.081
223135LEUHH8.1740.006
224135LEUHAH4.0800.001
225135LEUHB2H1.1940.003
226135LEUHB3H1.1940.003
227135LEUHD11H0.8330.001
228135LEUHD12H0.8330.001
229135LEUHD13H0.8330.001
230135LEUHD21H1.0370.006
231135LEUHD22H1.0370.006
232135LEUHD23H1.0370.006
233135LEUCAC56.0320.000
234135LEUCBC39.4800.000
235135LEUCD1C24.9520.000
236135LEUCD2C20.4870.000
237135LEUNN124.8020.001
238136VALHH8.8800.006
239136VALHAH3.5220.003
240136VALHBH2.1060.000
241136VALHG11H1.0340.001
242136VALHG12H1.0340.001
243136VALHG13H1.0340.001
244136VALHG21H0.9630.002
245136VALHG22H0.9630.002
246136VALHG23H0.9630.002
247136VALCAC64.7310.000
248136VALCBC28.7470.000
249136VALCG1C20.0000.000
250136VALCG2C18.4050.000
251136VALNN121.3000.000
252137ASNHH8.4990.002
253137ASNHAH4.3080.001
254137ASNHB2H2.8940.003
255137ASNHB3H2.7680.001
256137ASNHD21H7.4500.002
257137ASNHD22H6.8210.004
258137ASNCAC53.2900.000
259137ASNCBC35.3200.000
260137ASNNN116.3400.009
261137ASNND2N112.7760.000
262138THRHH7.5740.001
263138THRHAH3.8750.003
264138THRHBH3.9580.011
265138THRHG21H0.5320.001
266138THRHG22H0.5320.001
267138THRHG23H0.5320.001
268138THRCAC63.7000.000
269138THRCBC66.3120.000
270138THRCG2C17.8960.000
271138THRNN115.3970.000
272139PHEHH7.6990.004
273139PHEHAH3.9120.001
274139PHEHB2H3.4170.001
275139PHEHB3H3.4170.001
276139PHEHD1H7.3320.004
277139PHEHD2H7.3320.004
278139PHEHE1H6.4640.001
279139PHEHE2H6.4640.001
280139PHECAC57.8000.000
281139PHECBC37.7570.000
282139PHECD2C131.5340.000
283139PHECE2C131.4000.000
284139PHENN115.0460.001
285140ARGHH8.6810.004
286140ARGHG2H2.0060.003
287140ARGHG3H2.0060.003
288140ARGHD2H3.1270.000
289140ARGHD3H3.1270.000
290140ARGCGC25.7500.000
291140ARGCDC40.9150.000
292140ARGNN121.2960.042
293141VALHH6.8830.003
294141VALHAH3.8450.004
295141VALHBH1.7960.004
296141VALHG11H0.4250.001
297141VALHG12H0.4250.001
298141VALHG13H0.4250.001
299141VALHG21H0.3540.002
300141VALHG22H0.3540.002
301141VALHG23H0.3540.002
302141VALCAC60.3900.000
303141VALCBC27.7260.000
304141VALCG1C16.9560.000
305141VALCG2C16.2750.000
306141VALNN116.5460.002
307142PHEHH7.6840.008
308142PHEHD1H7.4260.031
309142PHEHD2H7.4260.031
310142PHECD1C131.3450.000
311142PHENN119.6020.046
312143GLYHH7.6970.001
313143GLYNN110.4060.000
314144SERHH8.0550.004
315144SERHAH4.3450.000
316144SERHB2H3.8990.006
317144SERHB3H3.7890.006
318144SERCAC57.2500.000
319144SERCBC60.4500.000
320144SERNN113.2120.052
321145LEUHH8.1980.003
322145LEUHD11H1.0170.001
323145LEUHD12H1.0170.001
324145LEUHD13H1.0170.001
325145LEUHD21H0.4070.001
326145LEUHD22H0.4070.001
327145LEUHD23H0.4070.001
328145LEUCD1C22.7600.000
329145LEUCD2C26.3680.000
330145LEUNN123.9270.012
331146SERHH8.1400.002
332146SERHB2H3.6760.001
333146SERHB3H3.6760.001
334146SERCBC63.0760.000
335146SERNN114.0000.000
336147VALHH8.5530.002
337147VALHBH1.8360.000
338147VALHG11H0.8450.001
339147VALHG12H0.8450.001
340147VALHG13H0.8450.001
341147VALCBC31.6280.000
342147VALCG1C18.9400.000
343147VALNN120.1260.022
344148GLUHH8.8610.005
345148GLUHAH4.4220.002
346148GLUHB2H1.9740.000
347148GLUHB3H1.9740.000
348148GLUCAC51.7000.000
349148GLUCBC31.2020.000
350148GLUNN123.5140.077
351149TRPHD1H7.2140.004
352149TRPHE1H10.8360.011
353149TRPHZ2H7.0430.004
354149TRPHZ3H6.5020.004
355149TRPHH2H6.9230.007
356149TRPCD1C128.8000.000
357149TRPCZ2C115.1130.000
358149TRPCZ3C120.1810.000
359149TRPCH2C123.8340.000
360149TRPNE1N133.2650.069
361151GLYHH8.8960.016
362151GLYNN112.5920.195
363152LYSHH7.8940.009
364152LYSNN126.4810.098
365153ASPHH8.0890.001
366153ASPNN115.4000.000
367154GLYHH7.6110.003
368154GLYNN109.6480.000
369156HISHH8.3800.005
370156HISHD2H7.1280.000
371156HISCD2C122.4920.000
372156HISNN116.4000.000
373158ARGHH8.4950.000
374158ARGNN119.4500.000
375159CYSHH7.7530.001
376159CYSNN117.1810.000
377164TYRHH7.0750.001
378164TYRHAH5.2930.001
379164TYRHD1H6.6650.002
380164TYRHD2H6.6650.002
381164TYRHE1H6.9330.001
382164TYRHE2H6.9330.001
383164TYRCAC52.9220.000
384164TYRCD1C133.3690.000
385164TYRCE1C117.7840.000
386164TYRNN116.5580.010
387165VALHH7.9550.002
388165VALHBH2.2510.007
389165VALHG11H0.5340.003
390165VALHG12H0.5340.003
391165VALHG13H0.5340.003
392165VALHG21H0.6210.003
393165VALHG22H0.6210.003
394165VALHG23H0.6210.003
395165VALCBC33.4420.000
396165VALCG1C18.0480.000
397165VALCG2C20.6000.000
398165VALNN111.7000.000
399166TYRHH8.9120.012
400166TYRHE1H6.8060.000
401166TYRHE2H6.8060.000
402166TYRCE1C116.9000.000
403166TYRNN116.1990.000
404167LEUHH8.6680.002
405167LEUHAH4.5080.003
406167LEUHD11H0.2660.002
407167LEUHD12H0.2660.002
408167LEUHD13H0.2660.002
409167LEUHD21H-0.3100.000
410167LEUHD22H-0.3100.000
411167LEUHD23H-0.3100.000
412167LEUCAC49.8700.000
413167LEUCD1C18.7620.000
414167LEUCD2C21.9300.000
415167LEUNN120.9000.000
416168VALHH8.5750.002
417168VALHAH4.1390.005
418168VALHBH1.7070.001
419168VALHG11H0.0510.000
420168VALHG12H0.0510.000
421168VALHG13H0.0510.000
422168VALHG21H0.2050.000
423168VALHG22H0.2050.000
424168VALHG23H0.2050.000
425168VALCAC58.2180.000
426168VALCBC28.0920.000
427168VALCG1C17.9140.000
428168VALCG2C16.3670.000
429168VALNN122.6320.035
430169PHEHH8.6100.004
431169PHEHAH4.1710.000
432169PHEHE1H6.9130.000
433169PHEHE2H6.9130.000
434169PHECAC56.0000.000
435169PHECE2C129.6720.000
436169PHENN128.1060.030
437170GLUHH7.8540.001
438170GLUHAH4.0900.002
439170GLUHG2H2.2190.015
440170GLUHG3H2.1790.001
441170GLUCAC56.1420.000
442170GLUCGC34.0550.000
443170GLUNN119.8000.000
444171LEUHH8.2910.005
445171LEUHAH4.8180.006
446171LEUHB2H1.8260.001
447171LEUHB3H1.6960.001
448171LEUHD11H1.0130.006
449171LEUHD12H1.0130.006
450171LEUHD13H1.0130.006
451171LEUHD21H0.9980.006
452171LEUHD22H0.9980.006
453171LEUHD23H0.9980.006
454171LEUCAC50.2100.000
455171LEUCBC42.6090.000
456171LEUCD1C20.1980.000
457171LEUCD2C22.7480.000
458171LEUNN116.9000.000
459172GLUHH8.6560.002
460172GLUHG2H2.9390.005
461172GLUHG3H2.4410.010
462172GLUCGC32.9010.062
463172GLUNN126.6440.004
464173LYSHH8.2750.002
465173LYSHAH3.8930.003
466173LYSHB2H1.9650.002
467173LYSHB3H1.8530.018
468173LYSHG2H1.4760.020
469173LYSHG3H1.4230.000
470173LYSHD2H1.7060.002
471173LYSHD3H1.7060.002
472173LYSHE2H2.9920.003
473173LYSHE3H2.9920.003
474173LYSCAC56.3570.000
475173LYSCBC28.8190.000
476173LYSCGC21.2200.000
477173LYSCDC26.8050.000
478173LYSCEC39.2820.000
479173LYSNN117.5480.000
480174SERHH7.5280.000
481174SERHAH4.1310.003
482174SERHB2H4.1230.005
483174SERHB3H4.0460.006
484174SERCAC58.6950.000
485174SERCBC59.9140.000
486174SERNN116.8970.000
487175VALHH7.0420.005
488175VALHAH2.7000.004
489175VALHBH2.0510.003
490175VALHG11H0.3470.003
491175VALHG12H0.3470.003
492175VALHG13H0.3470.003
493175VALHG21H1.0260.005
494175VALHG22H1.0260.005
495175VALHG23H1.0260.005
496175VALCAC63.5290.000
497175VALCBC28.6690.000
498175VALCG1C17.2800.000
499175VALCG2C19.9000.000
500175VALNN121.0840.010
501176ARGHH6.8760.005
502176ARGHAH3.4990.000
503176ARGHG2H1.8360.006
504176ARGHG3H1.8360.006
505176ARGHD2H3.1700.002
506176ARGHD3H3.1700.002
507176ARGCAC56.9700.000
508176ARGCGC26.7100.000
509176ARGCDC40.7000.000
510176ARGNN116.9000.000
511177SERHH7.9230.001
512177SERHAH4.0630.033
513177SERHB2H4.1300.006
514177SERHB3H4.0390.007
515177SERCAC59.3370.000
516177SERCBC59.6420.000
517177SERNN116.1480.000
518178LEUHH7.5760.006
519178LEUHAH2.7420.001
520178LEUHD11H0.1970.001
521178LEUHD12H0.1970.001
522178LEUHD13H0.1970.001
523178LEUHD21H0.4290.000
524178LEUHD22H0.4290.000
525178LEUHD23H0.4290.000
526178LEUCAC54.6980.000
527178LEUCD1C20.5210.000
528178LEUCD2C23.8820.000
529178LEUNN125.4480.000
530179LEUHH7.9530.007
531179LEUHAH3.6750.002
532179LEUHB2H0.8550.001
533179LEUHB3H0.8550.001
534179LEUHD11H-0.4130.002
535179LEUHD12H-0.4130.002
536179LEUHD13H-0.4130.002
537179LEUHD21H-0.0870.001
538179LEUHD22H-0.0870.001
539179LEUHD23H-0.0870.001
540179LEUCAC55.3480.000
541179LEUCBC37.1080.000
542179LEUCD1C16.9300.000
543179LEUCD2C22.0320.000
544179LEUNN118.2250.000
545180GLNHH7.5360.002
546180GLNHAH4.1340.000
547180GLNHB2H2.2210.000
548180GLNHB3H2.2210.000
549180GLNHG2H2.5740.017
550180GLNHG3H2.5180.001
551180GLNCAC55.1910.000
552180GLNCBC25.7700.000
553180GLNCGC31.4460.005
554180GLNNN117.3150.025
555181ALAHH7.5510.004
556181ALAHB1H1.8940.000
557181ALAHB2H1.8940.000
558181ALAHB3H1.8940.000
559181ALACBC17.4100.000
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570184HISHH8.4730.003
571184HISHAH5.1900.002
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573184HISHB3H3.0350.002
574184HISHD2H6.9920.001
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576184HISCAC51.5250.000
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598187LEUHB2H1.7160.000
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610188SERHB3H3.8170.001
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630192LEUHGH1.5610.004
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632192LEUHD12H0.8110.001
633192LEUHD13H0.8110.001
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653195TYRHD2H7.0290.002
654195TYRHE1H6.5790.002
655195TYRHE2H6.5790.002
656195TYRCBC37.6650.000
657195TYRCD2C133.6030.000
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664196TYRHE1H6.5860.005
665196TYRHE2H6.5860.005
666196TYRCAC54.4490.000
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689199METHB3H2.1170.004
690199METHE1H2.0940.003
691199METHE2H2.0940.003
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693199METCBC33.9950.000
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7241108GLUHB2H1.9280.001
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7361109VALCBC30.7570.000
7371109VALCG1C18.3400.000
7381109VALNN125.0330.000
7391110GLNHH9.0290.004
7401110GLNHE21H8.0360.007
7411110GLNHE22H6.8950.001
7421110GLNNN127.2690.028
7431110GLNNE2N109.6560.000
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7451111VALHG11H0.7280.006
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7471111VALHG13H0.7280.006
7481111VALHG21H0.4060.002
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7501111VALHG23H0.4060.002
7511111VALCG1C18.3900.000
7521111VALCG2C18.3420.000
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7551112ILEHG21H1.2440.001
7561112ILEHG22H1.2440.001
7571112ILEHG23H1.2440.001
7581112ILEHD11H1.0390.001
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7601112ILEHD13H1.0390.001
7611112ILECG2C15.2080.000
7621112ILECD1C10.3620.000
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7641114TRPHH10.4820.004
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7661114TRPHD1H7.0780.016
7671114TRPHE1H9.6470.002
7681114TRPHZ2H6.7780.008
7691114TRPHZ3H7.7010.010
7701114TRPCAC53.7500.000
7711114TRPCD1C127.3340.000
7721114TRPCZ2C113.7000.000
7731114TRPCZ3C121.3390.000
7741114TRPNN123.0640.019
7751114TRPNE1N129.5920.069
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7771115VALHBH1.4660.002
7781115VALHG11H0.3090.008
7791115VALHG12H0.3090.008
7801115VALHG13H0.3090.008
7811115VALCBC29.6250.000
7821115VALCG1C18.6800.000
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7851116LEUHAH4.2610.007
7861116LEUHB2H1.5390.008
7871116LEUHB3H1.0420.001
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7891116LEUHD12H0.3640.019
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7951116LEUCBC37.7750.025
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8171120ASNCAC50.8050.000
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8211121PHEHD1H6.9150.000
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8231121PHEHE1H7.0820.004
8241121PHEHE2H7.0820.004
8251121PHECD2C131.3340.000
8261121PHECE2C131.4660.000
8271121PHENN122.4480.000
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8311122VALHG11H0.9240.002
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8331122VALHG13H0.9240.002
8341122VALHG21H0.7760.000
8351122VALHG22H0.7760.000
8361122VALHG23H0.7760.000
8371122VALCAC57.6610.000
8381122VALCBC30.3450.000
8391122VALCG1C17.9000.000
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8411122VALNN126.8810.031
8421123ARGHH7.8330.004
8431123ARGHAH3.8990.002
8441123ARGHB2H1.5170.005
8451123ARGHB3H1.5170.005
8461123ARGHG2H1.6650.008
8471123ARGHG3H1.5100.004
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8491123ARGHD3H3.1320.003
8501123ARGCAC54.5690.000
8511123ARGCBC28.2890.000
8521123ARGCGC25.0220.000
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8591124SERCAC52.0230.000
8601124SERCBC61.6100.000
8611124SERNN112.4780.029
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8631128ARGNN122.5760.024
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8651129LEUHD11H0.3240.002
8661129LEUHD12H0.3240.002
8671129LEUHD13H0.3240.002
8681129LEUHD21H0.4820.000
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8711129LEUCD1C22.0520.000
8721129LEUCD2C20.9780.000
8731129LEUNN126.1760.024
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8751130ASPHB2H2.7390.004
8761130ASPHB3H2.4010.001
8771130ASPCBC39.7570.000
8781130ASPNN124.9370.000
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8801131PROCAC62.3600.000
8811132SERHH8.3890.003
8821132SERNN113.7200.033
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8851133ARGHG2H1.4250.015
8861133ARGHG3H1.0940.001
8871133ARGCAC51.9390.000
8881133ARGCGC25.1400.000
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8911134THRHAH5.6190.002
8921134THRHBH4.0940.002
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8941134THRCBC67.6000.000
8951134THRNN118.4420.000
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8971135VALHAH5.1750.010
8981135VALHG21H0.8870.001
8991135VALHG22H0.8870.001
9001135VALHG23H0.8870.001
9011135VALCAC55.8920.000
9021135VALCG2C16.0000.000
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9041136PHEHH9.3810.005
9051136PHEHD1H7.2600.029
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9071136PHEHE1H6.7580.004
9081136PHEHE2H6.7580.004
9091136PHECD1C130.0340.000
9101136PHECE1C129.9060.000
9111136PHENN124.6160.014
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9141137VALHG12H0.6730.006
9151137VALHG13H0.6730.006
9161137VALCAC56.5430.000
9171137VALCG1C18.5220.000
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9191138GLYHA2H3.5790.006
9201138GLYHA3H3.5790.006
9211138GLYCAC40.4060.000
9221138GLYNN112.7100.008
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9241139ALAHAH3.9590.001
9251139ALAHB1H1.4510.000
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9281139ALACAC49.4000.000
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9331140LEUHD11H0.4320.005
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9471143METHG2H2.5470.002
9481143METHG3H2.5100.000
9491143METHE1H2.1710.000
9501143METHE2H2.1710.000
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9521143METCAC53.7520.000
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9551143METCEC14.3820.000
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9571144LEUHH7.6330.002
9581144LEUHB2H1.9320.001
9591144LEUHB3H1.9320.001
9601144LEUHD11H0.8390.005
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9621144LEUHD13H0.8390.005
9631144LEUHD21H0.7910.001
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9661144LEUCBC39.5390.000
9671144LEUCD1C23.8000.000
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9691144LEUNN119.1860.044
9701145ASNHH7.2180.007
9711145ASNNN117.5970.006
9721146ALAHH8.4290.001
9731146ALAHB1H1.0950.003
9741146ALAHB2H1.0950.003
9751146ALAHB3H1.0950.003
9761146ALACBC14.8870.000
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9791147GLUHAH2.8380.011
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9811147GLUNN119.5500.047
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9831148ALAHAH3.6150.001
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9851148ALAHB2H1.5010.002
9861148ALAHB3H1.5010.002
9871148ALACAC52.0700.000
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9891148ALANN121.1000.000
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9911149LEUHAH3.6120.002
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9931149LEUHD12H0.5240.001
9941149LEUHD13H0.5240.001
9951149LEUHD21H0.6330.004
9961149LEUHD22H0.6330.004
9971149LEUHD23H0.6330.004
9981149LEUCAC54.9080.000
9991149LEUCD1C22.6200.000
10001149LEUCD2C19.8000.000
10011149LEUNN118.2090.000
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10041150ALAHB1H1.0910.002
10051150ALAHB2H1.0910.002
10061150ALAHB3H1.0910.002
10071150ALACAC52.1500.000
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10091150ALANN117.8500.050
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10111151ALAHAH3.7940.000
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10131151ALAHB2H1.3510.002
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10191152ILEHAH2.4180.001
10201152ILEHBH1.0830.002
10211152ILEHG21H0.0090.005
10221152ILEHG22H0.0090.005
10231152ILEHG23H0.0090.005
10241152ILEHD11H0.0490.003
10251152ILEHD12H0.0490.003
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10271152ILECAC61.6920.000
10281152ILECBC35.3900.000
10291152ILECG2C12.1200.000
10301152ILECD1C11.9660.000
10311152ILENN119.1440.045
10321153LEUHH7.5310.004
10331153LEUHAH4.0260.005
10341153LEUHD11H0.8660.003
10351153LEUHD12H0.8660.003
10361153LEUHD13H0.8660.003
10371153LEUHD21H0.8890.004
10381153LEUHD22H0.8890.004
10391153LEUHD23H0.8890.004
10401153LEUCAC56.2520.000
10411153LEUCD1C22.0000.000
10421153LEUCD2C21.2420.000
10431153LEUNN116.0000.000
10441154ASNHH8.7940.000
10451154ASNHAH4.2720.004
10461154ASNCAC54.9200.000
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10481155ASPHH8.4330.004
10491155ASPHAH4.3800.005
10501155ASPCAC54.5000.000
10511155ASPNN122.2260.026
10521156LEUHH7.1600.004
10531156LEUHAH3.9520.000
10541156LEUHB2H0.0140.009
10551156LEUHB3H0.0140.009
10561156LEUHD11H0.8420.003
10571156LEUHD12H0.8420.003
10581156LEUHD13H0.8420.003
10591156LEUHD21H0.6020.001
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10621156LEUCAC54.0000.000
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10641156LEUCD1C19.5000.000
10651156LEUCD2C24.7790.000
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10681157PHEHAH4.9250.009
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10701157PHEHD2H7.2170.006
10711157PHECAC54.5000.000
10721157PHECD2C130.1420.000
10731157PHENN115.3000.000
10741158GLYHH8.2140.002
10751158GLYHA2H4.2890.007
10761158GLYHA3H4.0460.002
10771158GLYCAC41.4500.000
10781158GLYNN111.5130.009
10791159GLYHH7.8090.000
10801159GLYHA2H3.9050.006
10811159GLYHA3H3.9050.006
10821159GLYCAC44.4270.000
10831159GLYNN99.9310.000
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10851160VALHAH3.6970.002
10861160VALHBH1.7540.005
10871160VALHG11H0.7000.002
10881160VALHG12H0.7000.002
10891160VALHG13H0.7000.002
10901160VALCAC62.3520.000
10911160VALCBC28.9750.000
10921160VALCG1C19.3020.000
10931160VALNN120.9480.000
10941161VALHH8.7210.001
10951161VALHG11H0.9430.000
10961161VALHG12H0.9430.000
10971161VALHG13H0.9430.000
10981161VALHG21H0.7500.005
10991161VALHG22H0.7500.005
11001161VALHG23H0.7500.005
11011161VALCG1C19.9940.000
11021161VALCG2C16.4480.000
11031161VALNN120.5000.000
11041162TYRHH7.4130.001
11051162TYRHAH5.3290.002
11061162TYRHD1H6.8410.001
11071162TYRHD2H6.8410.001
11081162TYRHE1H6.4970.001
11091162TYRHE2H6.4970.001
11101162TYRCAC54.0130.000
11111162TYRCD2C133.2030.000
11121162TYRCE2C117.9100.000
11131162TYRNN123.5150.012
11141163ALAHH8.1890.000
11151163ALAHAH4.8540.004
11161163ALAHB1H1.1600.001
11171163ALAHB2H1.1600.001
11181163ALAHB3H1.1600.001
11191163ALACAC47.9300.000
11201163ALACBC21.4960.000
11211163ALANN129.0800.000
11221164GLYHH8.7430.003
11231164GLYHA2H3.6640.025
11241164GLYHA3H3.6640.025
11251164GLYCAC41.2620.000
11261164GLYNN108.0930.045
11271165ILEHH8.7260.004
11281165ILEHG12H1.2660.017
11291165ILEHG13H1.2660.017
11301165ILEHG21H0.8870.006
11311165ILEHG22H0.8870.006
11321165ILEHG23H0.8870.006
11331165ILEHD11H0.5340.000
11341165ILEHD12H0.5340.000
11351165ILEHD13H0.5340.000
11361165ILECG1C25.1000.000
11371165ILECG2C14.5700.000
11381165ILECD1C7.3390.000
11391165ILENN123.1000.000
11401166ASPHH8.9710.006
11411166ASPNN129.8730.049
11421167THRHH8.1080.003
11431167THRHAH5.0630.010
11441167THRHG21H0.7980.001
11451167THRHG22H0.7980.001
11461167THRHG23H0.7980.001
11471167THRCAC56.4700.000
11481167THRCG2C17.5570.000
11491167THRNN110.8460.054
11501168ASPHH8.8360.002
11511168ASPNN122.0480.000
11521170HISHH8.3120.002
11531170HISHE1H7.7490.001
11541170HISCE1C138.7970.000
11551170HISNN120.3920.014
11561171LYSHH8.8830.003
11571171LYSHAH3.8170.002
11581171LYSCAC54.2500.000
11591171LYSNN120.4980.119
11601172TYRHH8.1600.005
11611172TYRNN122.5380.013
11621174ILEHH7.6180.002
11631174ILEHG12H1.1490.005
11641174ILEHG13H1.1490.005
11651174ILEHG21H0.7960.005
11661174ILEHG22H0.7960.005
11671174ILEHG23H0.7960.005
11681174ILEHD11H0.7000.005
11691174ILEHD12H0.7000.005
11701174ILEHD13H0.7000.005
11711174ILECG1C23.3400.000
11721174ILECG2C15.3400.000
11731174ILECD1C11.5630.000
11741174ILENN113.4170.000
11751175GLYHH7.9300.005
11761175GLYHA2H3.9440.003
11771175GLYHA3H3.9440.003
11781175GLYCAC42.5980.000
11791175GLYNN111.9450.000
11801176SERHH7.1960.002
11811176SERNN113.0890.000
11821177GLYHH8.7460.002
11831177GLYNN108.6000.000
11841178ARGHH9.1390.003
11851178ARGHAH5.5640.003
11861178ARGCAC51.6000.000
11871178ARGNN120.2600.092
11881179VALHH8.4230.000
11891179VALHAH4.7880.006
11901179VALHBH1.4740.002
11911179VALHG11H0.8200.004
11921179VALHG12H0.8200.004
11931179VALHG13H0.8200.004
11941179VALHG21H0.4050.003
11951179VALHG22H0.4050.003
11961179VALHG23H0.4050.003
11971179VALCAC58.0000.000
11981179VALCBC32.8570.000
11991179VALCG1C17.1400.000
12001179VALCG2C19.4520.000
12011179VALNN120.0900.000
12021180THRHH8.8050.001
12031180THRHAH4.9850.001
12041180THRHBH3.6470.000
12051180THRHG21H1.2230.001
12061180THRHG22H1.2230.001
12071180THRHG23H1.2230.001
12081180THRCAC60.0020.000
12091180THRCBC67.8820.000
12101180THRCG2C21.1800.000
12111180THRNN124.6060.000
12121181PHEHH8.7850.003
12131181PHEHD1H7.6870.002
12141181PHEHD2H7.6870.002
12151181PHEHE1H7.2550.007
12161181PHEHE2H7.2550.007
12171181PHEHZH6.8010.009
12181181PHECD2C132.9000.000
12191181PHECE2C131.7340.000
12201181PHECZC128.5340.000
12211181PHENN126.1000.000
12221182ASNHH9.8290.009
12231182ASNHAH4.7740.001
12241182ASNHB2H3.4270.003
12251182ASNHB3H3.4270.003
12261182ASNHD21H7.2870.002
12271182ASNHD22H6.9250.000
12281182ASNCAC49.0920.000
12291182ASNCBC35.6670.000
12301182ASNNN117.1630.014
12311182ASNND2N110.1940.051
12321183ASNHH7.4630.002
12331183ASNNN112.8000.000
12341185ARGHH8.2290.004
12351185ARGHAH3.9730.001
12361185ARGHB2H1.9880.001
12371185ARGHB3H1.9880.001
12381185ARGHG2H1.7520.000
12391185ARGHG3H1.7520.000
12401185ARGHD2H3.2320.003
12411185ARGHD3H3.2320.003
12421185ARGCAC57.4350.000
12431185ARGCBC26.3490.000
12441185ARGCGC24.3000.000
12451185ARGCDC40.4320.000
12461185ARGNN121.7480.000
12471186SERHH8.8020.002
12481186SERHAH3.8510.001
12491186SERCAC60.2500.000
12501186SERNN118.9480.000
12511187TYRHH6.2730.002
12521187TYRHAH3.0980.003
12531187TYRHD1H6.8440.003
12541187TYRHD2H6.8440.003
12551187TYRHE1H6.7930.004
12561187TYRHE2H6.7930.004
12571187TYRCAC57.9000.000
12581187TYRCD1C132.7690.000
12591187TYRCE1C119.2440.000
12601187TYRNN119.1140.003
12611188LEUHH8.3700.007
12621188LEUHAH3.6010.007
12631188LEUHB2H1.8370.007
12641188LEUHB3H1.3810.001
12651188LEUHD11H0.8770.001
12661188LEUHD12H0.8770.001
12671188LEUHD13H0.8770.001
12681188LEUHD21H0.8950.003
12691188LEUHD22H0.8950.003
12701188LEUHD23H0.8950.003
12711188LEUCAC54.3920.000
12721188LEUCBC38.5570.000
12731188LEUCD1C19.5870.000
12741188LEUCD2C22.5520.000
12751188LEUNN118.9220.022
12761189LYSHH8.0670.001
12771189LYSHAH3.7700.002
12781189LYSHB2H1.8770.002
12791189LYSHB3H1.8380.006
12801189LYSCAC56.5780.000
12811189LYSCBC29.7770.000
12821189LYSNN121.6770.000
12831190ALAHH7.0570.001
12841190ALAHAH2.4890.000
12851190ALAHB1H0.6050.001
12861190ALAHB2H0.6050.001
12871190ALAHB3H0.6050.001
12881190ALACAC51.7000.000
12891190ALACBC15.6270.000
12901190ALANN124.0320.011
12911191VALHH7.5640.001
12921191VALHAH3.2210.001
12931191VALHBH1.6470.004
12941191VALHG11H0.3680.005
12951191VALHG12H0.3680.005
12961191VALHG13H0.3680.005
12971191VALHG21H0.6470.003
12981191VALHG22H0.6470.003
12991191VALHG23H0.6470.003
13001191VALCAC62.7800.000
13011191VALCBC28.7270.000
13021191VALCG1C19.1700.000
13031191VALCG2C18.6740.000
13041191VALNN114.1140.003
13051192SERHH7.8280.000
13061192SERHAH4.1280.002
13071192SERHB2H3.9020.002
13081192SERHB3H3.8370.003
13091192SERCAC58.0000.000
13101192SERCBC60.3000.000
13111192SERNN114.9640.000
13121193ALAHH7.5780.003
13131193ALAHAH4.1860.000
13141193ALAHB1H1.6310.000
13151193ALAHB2H1.6310.000
13161193ALAHB3H1.6310.000
13171193ALACAC52.1400.000
13181193ALACBC16.2590.000
13191193ALANN124.7000.000
13201194ALAHH7.3030.000
13211194ALAHAH3.9940.004
13221194ALAHB1H1.5730.002
13231194ALAHB2H1.5730.002
13241194ALAHB3H1.5730.002
13251194ALACAC54.8100.000
13261194ALACBC16.0480.000
13271194ALANN114.7950.000
13281195PHEHH9.1020.001
13291195PHEHAH5.5750.002
13301195PHEHD1H7.1570.007
13311195PHEHD2H7.1570.007
13321195PHEHE1H7.2960.003
13331195PHEHE2H7.2960.003
13341195PHECAC53.9410.000
13351195PHECD2C132.4690.000
13361195PHECE2C131.4000.000
13371195PHENN119.7970.000
13381196VALHH8.4310.009
13391196VALHBH1.7460.001
13401196VALHG11H0.7180.001
13411196VALHG12H0.7180.001
13421196VALHG13H0.7180.001
13431196VALCBC33.4570.000
13441196VALCG1C18.8000.000
13451196VALNN118.1000.000
13461197GLUHH9.0740.006
13471197GLUNN128.5440.092
13481198ILEHH9.1570.003
13491198ILEHAH4.7440.002
13501198ILEHBH2.1230.002
13511198ILEHG21H0.9760.000
13521198ILEHG22H0.9760.000
13531198ILEHG23H0.9760.000
13541198ILEHD11H0.7740.002
13551198ILEHD12H0.7740.002
13561198ILEHD13H0.7740.002
13571198ILECAC58.5900.000
13581198ILECBC36.8790.000
13591198ILECG2C15.0880.000
13601198ILECD1C12.2820.000
13611198ILENN130.1100.009
13621199LYSHH9.1880.008
13631199LYSHAH4.8990.000
13641199LYSHB2H1.7300.000
13651199LYSHB3H1.6480.001
13661199LYSCAC52.9000.000
13671199LYSCBC31.4290.000
13681199LYSNN128.9030.007
13691200THRHH8.1110.002
13701200THRHAH4.9750.002
13711200THRHBH4.3540.013
13721200THRHG21H0.8210.000
13731200THRHG22H0.8210.000
13741200THRHG23H0.8210.000
13751200THRCAC56.3510.000
13761200THRCBC69.5110.000
13771200THRCG2C18.1300.000
13781200THRNN114.8920.056
13791201THRHH8.4250.003
13801201THRNN112.6480.000
13811202LYSHH7.4340.003
13821202LYSHAH4.3800.001
13831202LYSHB2H1.9210.000
13841202LYSHB3H1.9210.000
13851202LYSCAC53.0520.000
13861202LYSCBC31.5970.000
13871202LYSNN117.5140.038
13881203PHEHH6.8460.003
13891203PHEHAH4.7860.002
13901203PHEHD1H6.4540.000
13911203PHEHD2H6.4540.000
13921203PHEHE1H6.7810.014
13931203PHEHE2H6.7810.014
13941203PHECAC54.3100.000
13951203PHECD2C132.5000.000
13961203PHECE2C129.7060.000
13971203PHENN114.2950.053
13981204THRHH8.4570.005
13991204THRHAH5.4840.001
14001204THRHBH4.0380.004
14011204THRHG21H1.1860.001
14021204THRHG22H1.1860.001
14031204THRHG23H1.1860.001
14041204THRCAC58.1810.000
14051204THRCBC68.5220.000
14061204THRCG2C18.5580.000
14071204THRNN116.9970.000
14081205LYSHH9.3270.006
14091205LYSHAH4.7730.003
14101205LYSHB2H1.9530.001
14111205LYSHB3H1.9530.001
14121205LYSCAC51.8060.000
14131205LYSCBC34.5000.000
14141205LYSNN127.3380.009
14151206LYSHH8.6600.002
14161206LYSHAH5.2470.005
14171206LYSHB2H1.6880.001
14181206LYSHB3H1.6880.001
14191206LYSCAC52.7910.000
14201206LYSCBC30.0570.000
14211206LYSNN129.3540.002
14221207VALHH8.9770.009
14231207VALHG11H0.7400.005
14241207VALHG12H0.7400.005
14251207VALHG13H0.7400.005
14261207VALHG21H0.7630.001
14271207VALHG22H0.7630.001
14281207VALHG23H0.7630.001
14291207VALCG1C15.9600.000
14301207VALCG2C18.5000.000
14311207VALNN122.1580.068
14321208GLNHH8.0660.012
14331208GLNHE21H8.1980.006
14341208GLNHE22H6.6190.000
14351208GLNNN123.3970.043
14361208GLNNE2N113.9640.025
14371209ILEHH8.5560.002
14381209ILEHBH1.3920.001
14391209ILEHG21H0.5290.003
14401209ILEHG22H0.5290.003
14411209ILEHG23H0.5290.003
14421209ILEHD11H0.7630.001
14431209ILEHD12H0.7630.001
14441209ILEHD13H0.7630.001
14451209ILECBC36.9300.000
14461209ILECG2C15.3660.000
14471209ILECD1C11.6120.000
14481209ILENN125.6590.041
14491210ASPHH9.0990.007
14501210ASPHAH5.4550.005
14511210ASPHB2H2.8520.001
14521210ASPHB3H2.4260.006
14531210ASPCAC48.9830.000
14541210ASPCBC42.0930.011
14551210ASPNN127.5780.022
14561212TYRHH8.3570.006
14571212TYRHD1H6.9300.008
14581212TYRHD2H6.9300.008
14591212TYRHE1H6.8160.000
14601212TYRHE2H6.8160.000
14611212TYRCD1C132.9000.000
14621212TYRCE1C119.1030.000
14631212TYRNN124.6000.000

LACS Plot; CA
Referencing offset: 2.77 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: 2.77 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.01 ppm, Outliers: 1 Detail
Protein Blocks Logo
Calculated from 10 models in PDB: 2MKK, Strand ID: A Detail


Release date
2014-07-20
Citation
A fly trap mechanism provides sequence-specific RNA recognition by CPEB proteins
Afroz, T., Skrisovska, L., Belloc, E., Boixet, J.G., Mendez, R., Allain, F.H.-T.
Genes. Dev. (2014), 28, 1498-1514, PubMed 24990967 , DOI 10.1101/gad.241133.114 ,
Related entities 1. CPEB1RRM12, : 1 : 1 : 80 entities Detail
Experiments performed 21 experiments Detail
nullKeywords CPEB1, Cytoplasmic polyadenylation, Protein-RNA Interaction, RNA recognition motif (RRM), Translation regulation