BMRB: 19888

MINOR GROOVE RECOGNITION OF DNA BY THIAZOTROPSIN ANALOGUES

Authors

Alniss, H.Y., Salvia, M.-V., Sadikov, M., Golovchenko, I., Anthony, N.G., Khalaf, A.I., Mackay, S.P., Suckling, C.J., Parkinson, J.A.

Assembly

CGACGCGTCG with 5,6,7,8-TETRAHYDROBIOPTERIN

Entity

1. 5'-D(*CP*GP*AP*CP*GP*CP*GP*TP*CP*G)-3' (polymer), 10 monomers, 3108.964 × 2 Da Detail

CGACGCGTCG

2. thiazotropsin B (non-polymer), 558.676 × 2 Da

Total weight

7335.2803 Da

Max. entity weight

3108.964 Da

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 76.8 %, Completeness (bb): 71.4 % Detail

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Polymer type: polydeoxyribonucleotide

	Total	1H
All	76.8 % (76 of 99)	76.8 % (76 of 99)
Suger, PO4	71.4 % (50 of 70)	71.4 % (50 of 70)
Nucleobase	89.7 % (26 of 29)	89.7 % (26 of 29)
Aromatic	95.0 % (19 of 20)	95.0 % (19 of 20)
Methyl	100.0 % (1 of 1)	100.0 % (1 of 1)

1. 5'-D(*CP*GP*AP*CP*GP*CP*GP*TP*CP*G)-3'

CGACGCGTCG

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Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.4

#	Name	Isotope labeling	Type	Concentration
1	Thiazotropsin B	natural abundance		2 mM
2	5'-D(*CP*GP*AP*CP*GP*CP*GP*TP*CP*G)-3'	natural abundance		2 mM

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Release date

2014-07-27

Citation

Recognition of the DNA minor groove by thiazotropsin analogues
Alniss, H.Y., Salvia, M.-V., Sadikov, M., Golovchenko, I., Anthony, N.G., Khalaf, A.I., Mackay, S.P., Suckling, C.J., Parkinson, J.A.
Chembiochem. (2014), 15, 1978-1990, PubMed 25045155 , DOI 10.1002/cbic.201402202 , Abstract

Experiments performed 3 experiments Detail