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Solution NMR structure of the reovirus p15 fusion-associated small transmembrane (FAST) protein fusion-inducing lipid packing sensor (FLiPS) motif in dodecyl phosphocholine (DPC) micelles
Authors
Sarker, M., Duncan, R., Read, J., Rainey, J.
Assembly
P15 FLiPS
Entity
1. P15 FLiPS (polymer, Thiol state: not present), 21 monomers, 1967.353 Da Detail

XLGLLSYGAG VASLPLLNVI A


Formula weight
1967.353 Da
Exptl. method
solution NMR
Refine. method
torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 95.2 %, Completeness: 76.2 %, Completeness (bb): 83.1 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All76.2 % (163 of 214)98.1 % (104 of 106)44.3 % (39 of 88)100.0 % (20 of 20)
Backbone83.1 % (98 of 118)100.0 % (42 of 42)64.9 % (37 of 57)100.0 % (19 of 19)
Sidechain72.6 % (82 of 113)96.9 % (62 of 64)39.6 % (19 of 48)100.0 % (1 of 1)
Aromatic50.0 % (4 of 8)100.0 % (4 of 4) 0.0 % (0 of 4)
Methyl57.1 % (24 of 42)100.0 % (21 of 21)14.3 % (3 of 21)

1. entity 1

XLGLLSYGAG VASLPLLNVI A

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 310 K, pH 5


#NameIsotope labelingTypeConcentration
1entity_1natural abundance1 mM
2DPCnatural abundance150 mM
3DSSnatural abundance0.5 mM
4sodium azidenatural abundance0.2 mM
5sodium acetate[U-2H]20 mM
6H2Onatural abundance90 %
7D2Onatural abundance10 %

Protein Blocks Logo
Calculated from 50 models in PDB: 2MNS, Strand ID: A Detail


Release date
2014-04-21
Citation
Reovirus FAST Proteins Drive Pore Formation and Syncytiogenesis Using a Novel Helix-Loop-Helix Fusion-Inducing Lipid Packing Sensor
Read, J., Clancy, E., Sarker, M., Langelaan, D., Rainey, J., Duncan, R.
PLoS Pathog. (2015), 11, e1004962-e1004962, PubMed 26061049 , DOI 10.1371/journal.ppat.1004962 ,
Related entities 1. P15 FLiPS, : 1 : 5 entities Detail
Experiments performed 4 experiments Detail
NMR combined restraints 4 contents Detail
Keywords FAST Protein, Fusion Protein, P15 FLiPS, Reovirus