Search

Solution Structure of the Mediator Gall11 KIX Domain of C. Glabrata
Authors
Boeszoermenyi, A.A.B., Arthanari, H.H.A., Wagner, G.G.W., Anders, A., Artha, H.
Assembly
CG KIX
Entity
1. CG KIX (polymer, Thiol state: not present), 86 monomers, 9724.009 Da Detail

MSSKETIPMH QRSQNVAELL TVLMDINKIN GGDSTTAEKM KVHAKSFEAA LFEKSSSKEE YQKTMKSKID AMRSTRDKRK RESVGS


Formula weight
9724.009 Da
Source organism
[Candida] glabrata
Exptl. method
solution NMR
Refine. method
CYANA AND AMBER
Data set
assigned_chemical_shifts, spectral_peak_list
Chem. Shift Complete1
Sequence coverage: 100.0 %, Completeness: 86.1 %, Completeness (bb): 98.1 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All86.1 % (866 of 1006)82.6 % (440 of 533)90.1 % (344 of 382)90.1 % (82 of 91)
Backbone98.1 % (504 of 514)97.1 % (169 of 174)99.2 % (253 of 255)96.5 % (82 of 85)
Sidechain77.2 % (444 of 575)75.5 % (271 of 359)82.4 % (173 of 210) 0.0 % (0 of 6)
Aromatic36.1 % (13 of 36)50.0 % (9 of 18)22.2 % (4 of 18)
Methyl97.2 % (70 of 72)97.2 % (35 of 36)97.2 % (35 of 36)

1. CG KIX

MSSKETIPMH QRSQNVAELL TVLMDINKIN GGDSTTAEKM KVHAKSFEAA LFEKSSSKEE YQKTMKSKID AMRSTRDKRK RESVGS

Sample #1

Solvent system 93% H2O/7% D2O, Pressure 1.000 atm, Temperature 298.150 K, pH 6.500


#NameIsotope labelingTypeConcentration
1CG_KIX[U-15N]0.7 mM
2sodium phosphatenatural abundance10 mM
3potassium phosphatenatural abundance2 mM
4sodium chloridenatural abundance137 mM
5potassium chloridenatural abundance2.7 mM
6EDTAnatural abundance1 mM
Sample #2

Solvent system 93% H2O/7% D2O, Pressure 1.000 atm, Temperature 298.150 K, pH 6.500


#NameIsotope labelingTypeConcentration
7CG_KIX[U-99% 13C; U-99% 15N]0.7 mM
8sodium phosphatenatural abundance10 mM
9potassium phosphatenatural abundance2 mM
10sodium chloridenatural abundance137 mM
11potassium chloridenatural abundance2.7 mM
12EDTAnatural abundance1 mM
Sample #3

Solvent system 93% H2O/7% D2O, Pressure 1.000 atm, Temperature 298.150 K, pH 6.500


#NameIsotope labelingTypeConcentration
13CG_KIX[U-13C; U-15N]-ILV0.7 mM
14sodium phosphatenatural abundance10 mM
15potassium phosphatenatural abundance2 mM
16sodium chloridenatural abundance137 mM
17potassium chloridenatural abundance2.7 mM
18EDTAnatural abundance1 mM

Chem. Shift Complete2
Sequence coverage: 79.1 %, Completeness: 67.6 %, Completeness (bb): 70.8 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All67.6 % (1360 of 2012)70.4 % (750 of 1066)66.4 % (507 of 764)56.6 % (103 of 182)
Backbone70.8 % (728 of 1028)73.9 % (257 of 348)72.2 % (368 of 510)60.6 % (103 of 170)
Sidechain65.8 % (757 of 1150)68.7 % (493 of 718)62.9 % (264 of 420) 0.0 % (0 of 12)
Aromatic43.1 % (31 of 72)61.1 % (22 of 36)25.0 % (9 of 36)
Methyl90.3 % (130 of 144)95.8 % (69 of 72)84.7 % (61 of 72)

1. CG KIX

MSSKETIPMH QRSQNVAELL TVLMDINKIN GGDSTTAEKM KVHAKSFEAA LFEKSSSKEE YQKTMKSKID AMRSTRDKRK RESVGS

Sample

Solvent system 93% H2O/7% D2O, Pressure 1.000 atm, Temperature 298.150 K, pH 6.500


#NameIsotope labelingTypeConcentration
7CG_KIX[U-99% 13C; U-99% 15N]0.7 mM
8sodium phosphatenatural abundance10 mM
9potassium phosphatenatural abundance2 mM
10sodium chloridenatural abundance137 mM
11potassium chloridenatural abundance2.7 mM
12EDTAnatural abundance1 mM

Chem. Shift Complete3
Sequence coverage: 100.0 %, Completeness: 65.8 %, Completeness (bb): 66.5 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All65.8 % (1986 of 3018)77.0 % (1231 of 1599)49.7 % (570 of 1146)67.8 % (185 of 273)
Backbone66.5 % (1025 of 1542)81.0 % (423 of 522)54.5 % (417 of 765)72.5 % (185 of 255)
Sidechain63.9 % (1103 of 1725)75.0 % (808 of 1077)46.8 % (295 of 630) 0.0 % (0 of 18)
Aromatic39.8 % (43 of 108)63.0 % (34 of 54)16.7 % (9 of 54)
Methyl78.2 % (169 of 216)94.4 % (102 of 108)62.0 % (67 of 108)

1. CG KIX

MSSKETIPMH QRSQNVAELL TVLMDINKIN GGDSTTAEKM KVHAKSFEAA LFEKSSSKEE YQKTMKSKID AMRSTRDKRK RESVGS

Sample

Solvent system 93% H2O/7% D2O, Pressure 1.000 atm, Temperature 298.150 K, pH 6.500


#NameIsotope labelingTypeConcentration
1CG_KIX[U-15N]0.7 mM
2sodium phosphatenatural abundance10 mM
3potassium phosphatenatural abundance2 mM
4sodium chloridenatural abundance137 mM
5potassium chloridenatural abundance2.7 mM
6EDTAnatural abundance1 mM

Protein Blocks Logo
Calculated from 10 models in PDB: 4D7X, Strand ID: A Detail


Release date
2015-12-06
Citation
Inhibiting fungal multidrug resistance by disrupting an activator-Mediator interaction
Nishikawa, J., Boeszoermenyi, A.A.B., Vale, S., Sohn, Y., Sanglard, D., Sangiunetti, M., Gelev, V., Buhrlage, S., Gray, N., Wagner, G.G.W., Naar, A.A.M.N., Arthanari, H.H.A.
Nature (2016), 530, 485-489, PubMed 26886795 , DOI 10.1038/nature16963 ,
Related entities 1. CG KIX, : 1 : 1 : 6 entities Detail
Interaction partners 1. CG KIX, : 1 interactors Detail
Experiments performed 8 experiments Detail
nullKeywords TRANSCRIPTION