solution Structure of KstB-PCP in kosinostatin biosynthesis
SEMQHASVIA QFVVEEFLPD VAPADVDVDL DLVDNGVIDA LGLLKVIAWL EDRFGIAADD VELSPEHFRS IRSIDAFVVG ATTPPVEAKL Q
Polymer type: polypeptide(L)
Total | 1H | 13C | 15N | |
---|---|---|---|---|
All | 82.4 % (837 of 1016) | 91.1 % (469 of 515) | 68.5 % (281 of 410) | 95.6 % (87 of 91) |
Backbone | 81.5 % (437 of 536) | 95.0 % (172 of 181) | 67.7 % (182 of 269) | 96.5 % (83 of 86) |
Sidechain | 85.4 % (484 of 567) | 88.9 % (297 of 334) | 80.3 % (183 of 228) | 80.0 % (4 of 5) |
Aromatic | 40.0 % (28 of 70) | 71.4 % (25 of 35) | 5.9 % (2 of 34) | 100.0 % (1 of 1) |
Methyl | 98.6 % (136 of 138) | 100.0 % (69 of 69) | 97.1 % (67 of 69) |
1. entity
SEMQHASVIA QFVVEEFLPD VAPADVDVDL DLVDNGVIDA LGLLKVIAWL EDRFGIAADD VELSPEHFRS IRSIDAFVVG ATTPPVEAKL QSolvent system 90% H2O/10% D2O, pH 7.0, Details 80mM phosphate, 50mM Sodium chloride
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | KstB-PCP(apo) | [U-99% 13C; U-99% 15N] | 2 mM | |
2 | phosphate | natural abundance | 80 mM | |
3 | Sodium chloride | natural abundance | 50 mM |
Atom type | Mol. common name | Atom group | Value | Ref. method | Ref. type | Shift ratio |
---|---|---|---|---|---|---|
1H | water | protons | 4.76 ppm | na | direct | 1.0 |
Atom type | Mol. common name | Atom group | Value | Ref. method | Ref. type | Shift ratio |
---|---|---|---|---|---|---|
1H | water | protons | 4.76 ppm | na | direct | 1.0 |
Atom type | Mol. common name | Atom group | Value | Ref. method | Ref. type | Shift ratio |
---|---|---|---|---|---|---|
1H | water | protons | 4.76 ppm | na | direct | 1.0 |
Agilent INOVA - 600 MHz
State isotropic, Solvent system 90% H2O/10% D2O, pH 7.0, Details 80mM phosphate, 50mM Sodium chloride
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | KstB-PCP(apo) | [U-99% 13C; U-99% 15N] | 2 mM | |
2 | phosphate | natural abundance | 80 mM | |
3 | Sodium chloride | natural abundance | 50 mM |
Properties
Input source #1: NMR data (NEF) - Assigned chemical shifts, Distance restraints | combined_25447_2my6.nef |
Input source #2: Coordindates | 2my6.cif |
Diamagnetism of the molecular assembly | True (excluding Oxygen atoms) |
Whether the assembly has a disulfide bond | None |
Whether the assembly has a other bond | None |
Whether the assembly contains a cyclic polymer | None |
Overall data processing status | Warning |
Disulfide bonds
NoneOther bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)
NoneNon-standard residues
NoneSequence alignments
-0--------10--------20--------30--------40--------50--------60--------70--------80--------- SEMQHASVIAQFVVEEFLPDVAPADVDVDLDLVDNGVIDALGLLKVIAWLEDRFGIAADDVELSPEHFRSIRSIDAFVVGATTPPVEAKLQ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| SEMQHASVIAQFVVEEFLPDVAPADVDVDLDLVDNGVIDALGLLKVIAWLEDRFGIAADDVELSPEHFRSIRSIDAFVVGATTPPVEAKLQ --------10--------20--------30--------40--------50--------60--------70--------80--------90-
Chain assignments
Entity_assembly_ID (NMR) | Auth_asym_ID (model) | Length | Unmapped | Conflict | Sequence coverage (%) |
---|---|---|---|---|---|
A | A | 91 | 0 | 0 | 100.0 |
Content subtype: combined_25447_2my6.nef
Assigned chemical shifts
-0--------10--------20--------30--------40--------50--------60--------70--------80--------- SEMQHASVIAQFVVEEFLPDVAPADVDVDLDLVDNGVIDALGLLKVIAWLEDRFGIAADDVELSPEHFRSIRSIDAFVVGATTPPVEAKLQ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ..MQHASVIAQFVVEEFLPDVAPADVDVDLDLVDNGVIDALGLLKVIAWLEDRFGIAADDVELSPEHFRSIRSIDAFVVGATTPPVEAKLQ
Comp_index_ID | Comp_ID | Atom_ID | CS value (ppm) |
---|---|---|---|
43 | LYS | HZ1 | 7.228 |
43 | LYS | HZ2 | 7.228 |
43 | LYS | HZ3 | 7.228 |
60 | GLU | CD | 36.431 |
65 | HIS | HE2 | 6.78 |
67 | ARG | NH2 | 118.258 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 515 | 475 | 92.2 |
13C chemical shifts | 410 | 272 | 66.3 |
15N chemical shifts | 94 | 91 | 96.8 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 181 | 176 | 97.2 |
13C chemical shifts | 182 | 88 | 48.4 |
15N chemical shifts | 86 | 84 | 97.7 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 334 | 299 | 89.5 |
13C chemical shifts | 228 | 184 | 80.7 |
15N chemical shifts | 8 | 7 | 87.5 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 70 | 68 | 97.1 |
13C chemical shifts | 70 | 67 | 95.7 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 35 | 23 | 65.7 |
13C chemical shifts | 34 | 0 | 0.0 |
15N chemical shifts | 1 | 1 | 100.0 |
Distance restraints
-0--------10--------20--------30--------40--------50--------60--------70--------80--------- SEMQHASVIAQFVVEEFLPDVAPADVDVDLDLVDNGVIDALGLLKVIAWLEDRFGIAADDVELSPEHFRSIRSIDAFVVGATTPPVEAKLQ |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ..MQHASVIAQFVVEEFLPDVAPADVDVDLDLVDNGVIDALGLLKVIAWLEDRFGIAADDVELSPEHFRSIRSIDAFVVGATTPPVEAKL -0--------10--------20--------30--------40--------50--------60--------70--------80--------