Search

Staphylococcus aureus FusB:EF-GC3 complex.
Authors
Tomlinson, J.H., Thompson, G.S., Kalverda, A.P., Zhuravleva, A., O'Neill, A.
Assembly
Staphylococcus aureus FusB:EF-GC3 complex
Entity
1. EF-GC3 (polymer, Thiol state: all free), 292 monomers, 32234.15 Da Detail

MEFPEPVIHL SVEPKSKADQ DKMTQALVKL QEEDPTFHAH TDEETGQVII GGMGELHLDI LVDRMKKEFN VECNVGAPMV SYRETFKSSA QVQGKFSRQS GGRGQYGDVH IEFTPNETGA GFEFENAIVG GVVPREYIPS VEAGLKDAME NGVLAGYPLI DVKAKLYDGS YHDVDSSEMA FKIAASLALK EAAKKCDPVI LEPMMKVTIE MPEEYMGDIM GDVTSRRGRV DGMEPRGNAQ VVNAYVPLSE MFGYATSLRS NTQGRGTYTM YFDHYAEVPK SIAEDIIKKN KG


2. FusB (polymer, Thiol state: all other bound), 233 monomers, 27309.00 Da Detail

MGSSHHHHHH SSGLVPNGSH MKTMIYPHQY NYIRSVILRL KNVYKTVNDK ETVKVIQSET YNDINEIFGH IDDDIEESLK VLMNIRLSNK EIEAILNKFL EYVVPFELPS PQKLQKVFKK VKKIKIPQFE EYDLKVSSFV GWNELASNRK YIIYYDEKKQ LKGLYGEISN QVVKGFCTIC NKESNVSLFM KKSKTNSDGQ YVKKGDYICR DSIHCNKQLT DINQFYNFID KLD


3. Staphylococcus aureus FusB:EF-GC3 complex, entity ZN (non-polymer), 65.409 Da
Total weight
59608.56 Da
Max. entity weight
32234.15 Da
Entity Connection
na 4 Detail

IDTypeValue orderAtom ID 1Atom ID 2
1nasing2:CYS177:SG3:ZN1:ZN
2nasing2:CYS180:SG3:ZN1:ZN
3nasing2:CYS209:SG3:ZN1:ZN
4nasing2:CYS215:SG3:ZN1:ZN

Source organism
Staphylococcus aureus
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 62.7 %, Completeness: 18.0 %, Completeness (bb): 30.6 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All18.0 % (1119 of 6221)14.5 % (472 of 3251)14.2 % (344 of 2418)54.9 % (303 of 552)
Backbone30.6 % (950 of 3108)32.2 % (343 of 1066)19.9 % (306 of 1538)59.7 % (301 of 504)
Sidechain 5.5 % (197 of 3601) 5.9 % (129 of 2185) 4.8 % (66 of 1368) 4.2 % (2 of 48)
Aromatic 2.8 % (14 of 498) 4.0 % (10 of 249) 1.6 % (4 of 248) 0.0 % (0 of 1)
Methyl 5.3 % (28 of 528) 6.1 % (16 of 264) 4.5 % (12 of 264)

1. EF-GC3

MEFPEPVIHL SVEPKSKADQ DKMTQALVKL QEEDPTFHAH TDEETGQVII GGMGELHLDI LVDRMKKEFN VECNVGAPMV SYRETFKSSA QVQGKFSRQS GGRGQYGDVH IEFTPNETGA GFEFENAIVG GVVPREYIPS VEAGLKDAME NGVLAGYPLI DVKAKLYDGS YHDVDSSEMA FKIAASLALK EAAKKCDPVI LEPMMKVTIE MPEEYMGDIM GDVTSRRGRV DGMEPRGNAQ VVNAYVPLSE MFGYATSLRS NTQGRGTYTM YFDHYAEVPK SIAEDIIKKN KG

2. FusB

MGSSHHHHHH SSGLVPNGSH MKTMIYPHQY NYIRSVILRL KNVYKTVNDK ETVKVIQSET YNDINEIFGH IDDDIEESLK VLMNIRLSNK EIEAILNKFL EYVVPFELPS PQKLQKVFKK VKKIKIPQFE EYDLKVSSFV GWNELASNRK YIIYYDEKKQ LKGLYGEISN QVVKGFCTIC NKESNVSLFM KKSKTNSDGQ YVKKGDYICR DSIHCNKQLT DINQFYNFID KLD

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details 20 mM TrisHCl, 300 mM NaCl, 5 mM DTT, pH 8.0


#NameIsotope labelingTypeConcentration
1EF-GC3[U-100% 13C; U-100% 15N; partial 2H (grown in D2O with 1H glucose)]0.250 (±0.01) mM
2FusBnatural abundance0.375 (±0.01) mM
3TRISnatural abundance20 mM
4sodium chloridenatural abundance300 mM
5DTTnatural abundance5 mM
Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details 20 mM TrisHCl, 300 mM NaCl, 5 mM DTT, pH 8.0


#NameIsotope labelingTypeConcentration
6EF-GC3[U-100% 13C; U-100% 15N; partial 2H (grown in D2O with 1H glucose)]0.250 (±0.01) mM
7FusBnatural abundance0.375 (±0.01) mM
8TRISnatural abundance20 mM
9sodium chloridenatural abundance300 mM
10DTTnatural abundance5 mM
11Pf1 phagenatural abundance6 mg/mL
Sample #3

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details FusB R19C mutant tagged with MTSL; 20 mM TrisHCl, 300 mM NaCl, pH 8.0


#NameIsotope labelingTypeConcentration
12EF-GC3[U-100% 13C; U-100% 15N; partial 2H (grown in D2O with 1H glucose)]0.250 (±0.01) mM
13FusBnatural abundance0.375 (±0.01) mM
14TRISnatural abundance20 mM
15sodium chloridenatural abundance300 mM
16DTTnatural abundance5 mM
Sample #4

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details FusB T26C mutant tagged with MTSL; 20 mM TrisHCl, 300 mM NaCl, pH 8.0


#NameIsotope labelingTypeConcentration
17EF-GC3[U-100% 13C; U-100% 15N; partial 2H (grown in D2O with 1H glucose)]0.250 (±0.01) mM
18FusBnatural abundance0.375 (±0.01) mM
19TRISnatural abundance20 mM
20sodium chloridenatural abundance300 mM
21DTTnatural abundance5 mM
Sample #5

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details FusB N150C mutant tagged with MTSL; 20 mM TrisHCl, 300 mM NaCl, pH 8.0


#NameIsotope labelingTypeConcentration
22EF-GC3[U-100% 13C; U-100% 15N; partial 2H (grown in D2O with 1H glucose)]0.250 (±0.01) mM
23FusBnatural abundance0.375 (±0.01) mM
24TRISnatural abundance20 mM
25sodium chloridenatural abundance300 mM
26DTTnatural abundance5 mM
Sample #6

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details 20 mM TrisHCl, 300 mM NaCl, 5 mM DTT, pH 8.0


#NameIsotope labelingTypeConcentration
27EF-GC3[U-100% 15N, partial 2H (grown in D2O with 1H carbon source), 100 % natural abundance lysine]0.30 (±0.01) mM
28FusBnatural abundance0.45 (±0.01) mM
29TRISnatural abundance20 mM
30sodium chloridenatural abundance300 mM
31DTTnatural abundance5 mM
Sample #7

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details 20 mM TrisHCl, 300 mM NaCl, 5 mM DTT, pH 8.0


#NameIsotope labelingTypeConcentration
32EF-GC3[U-100% 15N, partial 2H (grown in D2O with 1H carbon source), 100 % natural abundance valine]0.30 (±0.01) mM
33FusBnatural abundance0.45 (±0.01) mM
34TRISnatural abundance20 mM
35sodium chloridenatural abundance300 mM
36DTTnatural abundance5 mM
Sample #8

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details 20 mM TrisHCl, 300 mM NaCl, 5 mM DTT, pH 8.0


#NameIsotope labelingTypeConcentration
37EF-GC3[U-100% 15N, partial 2H (grown in D2O with 1H carbon source), 100 % natural abundance phenylalanine]0.30 (±0.01) mM
38FusBnatural abundance0.45 (±0.01) mM
39TRISnatural abundance20 mM
40sodium chloridenatural abundance300 mM
41DTTnatural abundance5 mM
Sample #9

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details 20 mM TrisHCl, 300 mM NaCl, 5 mM DTT, pH 8.0


#NameIsotope labelingTypeConcentration
42EF-GC3[U-100% 15N, partial 2H (grown in D2O with 1H carbon source), 100 % natural abundance alanine]0.30 (±0.01) mM
43FusBnatural abundance0.45 (±0.01) mM
44TRISnatural abundance20 mM
45sodium chloridenatural abundance300 mM
46DTTnatural abundance5 mM
Sample #10

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 273 K, pH 8.000 (±0.01), Details 20 mM TrisHCl, 300 mM NaCl, 5 mM DTT, pH 8.0


#NameIsotope labelingTypeConcentration
47EF-GC3[U-100% 15N, partial 2H (grown in D2O with 1H carbon source), 100 % natural abundance asparagine]0.30 (±0.01) mM
48FusBnatural abundance0.45 (±0.01) mM
49TRISnatural abundance20 mM
50sodium chloridenatural abundance300 mM
51DTTnatural abundance5 mM

Protein Blocks Logo
Calculated from 1 models in PDB: 2MZW, Strand ID: A, B Detail


Release date
2016-01-24
Citation
A target-protection mechanism of antibiotic resistance at atomic resolution: insights into FusB-type fusidic acid resistance
Tomlinson, J.H., Thompson, G.S., Kalverda, A.P., Zhuravleva, A., O'Neill, A.
Sci. Rep. (2016), 6, 19524-19524, PubMed 26781961 , DOI 10.1038/srep19524 ,
Related entities 1. EF-GC3, : 2 : 186 entities Detail
Experiments performed 24 experiments Detail
NMR combined restraints 2 contents Detail
Keywords EF-G, FusB, allostery, antibiotic resistance, complex, fusidic acid