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NMR structures of hylin-a1 analogs: Hylin-K
Authors
Crusca Jr, E., Matos, C.O., Liao, L.M., Oliveira, A.L.
Assembly
Hylin-K
Entity
1. Hylin-K (polymer, Thiol state: not present), 20 monomers, 2064.580 Da Detail

KIFGAIWPLA LGALKNLIKX


Formula weight
2064.58 Da
Source organism
Boana albopunctata
Exptl. method
solution NMR
Refine. method
SIMULATED ANNEALING
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 95.0 %, Completeness: 86.5 %, Completeness (bb): 94.9 % Detail

Polymer type: polypeptide(L)

Total1H
All86.5 % (109 of 126)86.5 % (109 of 126)
Backbone94.9 % (37 of 39)94.9 % (37 of 39)
Sidechain82.8 % (72 of 87)82.8 % (72 of 87)
Aromatic100.0 % (11 of 11)100.0 % (11 of 11)
Methyl88.2 % (15 of 17)88.2 % (15 of 17)

1. Hylin-K

KIFGAIWPLA LGALKNLIKX

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.0, Details 100 mM [U-100% 2H] DPC-d38, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1DPC-d38[U-100% 2H]100 mM
2H2Onatural abundance90 %
3D2Onatural abundance10 %

Protein Blocks Logo
Calculated from 10 models in PDB: 5J6W, Strand ID: A Detail


Release date
2016-04-18
Citation
NMR structures and molecular dynamics simulation of hylin-a1 peptide analogs interacting with micelles
Crusca Jr, E., Camara, A., Matos, C.O., Marchetto, R., Cilli, E.M., Liao, L.M., de Oliveira, A.
J. Pept. Sci. (2017), 23, 421-430, PubMed 28425152 , DOI 10.1002/psc.3002 ,
Related entities 1. Hylin-K, : 1 : 4 entities Detail
Experiments performed 3 experiments Detail
NMR combined restraints 3 contents Detail
Keywords ANTIMICROBIAL PROTEIN, DPC, Hylin-a1 analogues, antimicrobial peptides