Solution Structure of a DNA Dodecamer with 5-methylcytosine at the 3rd Position
Polymer type: polydeoxyribonucleotide
Total | 1H | |
---|---|---|
All | 65.4 % (70 of 107) | 65.4 % (70 of 107) |
Suger, PO4 | 67.5 % (52 of 77) | 67.5 % (52 of 77) |
Nucleobase | 60.0 % (18 of 30) | 60.0 % (18 of 30) |
Aromatic | 72.7 % (16 of 22) | 72.7 % (16 of 22) |
Methyl | 100.0 % (2 of 2) | 100.0 % (2 of 2) |
1. entity 1
CGXGAATTCG CGSolvent system 100% D2O, Pressure 1 null, Temperature 298 K, pH 6.8, Details 50 mM sodium chloride, 10 mM potassium phosphate, 0.1 mM EDTA, 1 mM DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), 100% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') | natural abundance | 1 mM | |
2 | EDTA | natural abundance | 0.1 mM | |
3 | potassium phosphate | natural abundance | 10 mM | |
4 | sodium chloride | natural abundance | 50 mM |
Polymer type: polydeoxyribonucleotide
Total | 1H | |
---|---|---|
All | 37.9 % (81 of 214) | 37.9 % (81 of 214) |
Suger, PO4 | 33.8 % (52 of 154) | 33.8 % (52 of 154) |
Nucleobase | 48.3 % (29 of 60) | 48.3 % (29 of 60) |
Aromatic | 52.3 % (23 of 44) | 52.3 % (23 of 44) |
Methyl | 50.0 % (2 of 4) | 50.0 % (2 of 4) |
1. entity 1
CGXGAATTCG CGSolvent system 100% D2O, Pressure 1 null, Temperature 278 K, pH 6.8, Details 50 mM sodium chloride, 10 mM potassium phosphate, 0.1 mM EDTA, 1 mM DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), 100% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') | natural abundance | 1 mM | |
2 | EDTA | natural abundance | 0.1 mM | |
3 | potassium phosphate | natural abundance | 10 mM | |
4 | sodium chloride | natural abundance | 50 mM |