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Solution NMR Structure of Lasso Peptide Klebsidin
Authors
Bushin, L.B., Metelev, M., Severinov, K., Seyedsayamdost, M.R.
Assembly
Klebsidin
Entity
1. Klebsidin (polymer, Thiol state: not present), 19 monomers, 2051.238 Da Detail

GSDGPIIEFF NPNGVMHYG


Formula weight
2051.238 Da
Source organism
Klebsiella pneumoniae 4541-2
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 84.2 %, Completeness: 80.9 %, Completeness (bb): 72.5 % Detail

Polymer type: polypeptide(L)

Total1H
All80.9 % (89 of 110)80.9 % (89 of 110)
Backbone72.5 % (29 of 40)72.5 % (29 of 40)
Sidechain85.7 % (60 of 70)85.7 % (60 of 70)
Aromatic100.0 % (16 of 16)100.0 % (16 of 16)
Methyl100.0 % (6 of 6)100.0 % (6 of 6)

1. entity 1

GSDGPIIEFF NPNGVMHYG

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 Pa, Temperature 283 K, pH 7, Details 10 mg/mL Klebsidin, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1Klebsidinnatural abundance10 mg/mL

Protein Blocks Logo
Calculated from 10 models in PDB: 5UI7, Strand ID: A Detail


Release date
2017-01-29
Citation
Acinetodin and Klebsidin, RNA Polymerase Targeting Lasso Peptides Produced by Human Isolates of Acinetobacter gyllenbergii and Klebsiella pneumoniae
Metelev, M., Arseniev, A., Bushin, L.B., Kuznedelov, K., Artamonova, T.O., Kondratenko, R., Khodorkovskii, M., Seyedsayamdost, M.R., Severinov, K.
ACS Chem. Biol. (2017), 12, 814-824, PubMed 28106375 , DOI 10.1021/acschembio.6b01154 ,
Related entities 1. Klebsidin, : 1 entities Detail
Experiments performed 6 experiments Detail
NMR combined restraints 3 contents Detail
Keywords ANTIMICROBIAL PROTEIN, STRUCTURE FROM CYANA 2.1, lasso peptide RNAP inhibitor