BMRBj - BMREntryMaster

	Total	¹H	¹³C	¹⁵N
All	65.0 % (102 of 157)	87.5 % (70 of 80)	29.7 % (19 of 64)	100.0 % (13 of 13)
Backbone	73.1 % (57 of 78)	100.0 % (28 of 28)	43.2 % (16 of 37)	100.0 % (13 of 13)
Sidechain	52.2 % (47 of 90)	80.8 % (42 of 52)	13.2 % (5 of 38)
Methyl	37.5 % (12 of 32)	62.5 % (10 of 16)	12.5 % (2 of 16)

1. entity 1

GLSLLLSLGL KLLX

Show sample condition

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 (±0.01) atm, Temperature 298 (±0.1) K, pH 5.5 (±0.1), Details 2 mM DFT503, 122 mM SDS, 90% H2O/10% D2O

#	Name	Isotope labeling	Type	Concentration
1	DFT503	natural abundance		2 mM
2	SDS	natural abundance		122 mM

Protein Blocks Logo

Calculated from 5 models in PDB: 6MK8, Strand ID: A Detail

Release date

2018-10-17

Citation

Low cationicity is important for systemic in vivo efficacy of database-derived peptides against drug-resistant Gram-positive pathogens
Mishra, B., Narayana, J.L., Lushnikova, T., Wang, X., Wang, G.
Proc. Natl. Acad. Sci. U. S. A. (2019), 116, 13517-13522, PubMed 31209048 , DOI 10.1073/pnas.1821410116 , Abstract

Experiments performed 5 experiments Detail

Chemical shift validation 3 contents Detail

Properties

Input source #1: Assigned chemical shifts - Assigned chemical shifts	bmr30524_3.str
Diamagnetism of the molecular assembly	True (excluding Oxygen atoms)
Whether the assembly has a disulfide bond	None
Whether the assembly has a other bond	None
Whether the assembly contains a cyclic polymer	None
Overall data processing status	Warning

Disulfide bonds

None

Other bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)

None

Non-standard residues

Chain_ID	Seq_ID	Comp_ID	Chem_comp_name	Experimental evidences
1	14	NH2	AMINO GROUP	Assigned chemical shifts

Content subtype: bmr30524_3.str

#	Content subtype	Saveframe	Status	# of rows	Experiment type	Sequence coverage (%)
1	Assigned chemical shifts	assigned_chemical_shifts_1	Warning	114		100.0 (chain: 1, length: 14)
1	Chemical shift references	chem_shift_reference_1	OK	1		No information

Assigned chemical shifts

Saveframe: assigned_chemical_shifts_1
- Status: Warning
- Sequence coverage of experimental data
  - Entity_assembly_ID: 1, Chain length: 14, Sequence coverage: 100.0%
- Total number of assignments
  - ¹H chemical shifts: 87
  - ¹³C chemical shifts: 14
  - ¹⁵N chemical shifts: 13
- Completeness of assignments
  - Entity_assemble_ID: 1
- Histogram of normalized assigned chemical shifts
- Random coil index and derived parameters (S² and NMR RMSD)
  - Chain_ID: 1

Comp_index_ID	Comp_ID	Atom_ID	CS value (ppm)
11	LYS	HZ1	7.4921
11	LYS	HZ2	7.4921
11	LYS	HZ3	7.4921

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	82	68	82.9
¹³C chemical shifts	64	14	21.9
¹⁵N chemical shifts	14	13	92.9

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	28	27	96.4
¹³C chemical shifts	26	13	50.0
¹⁵N chemical shifts	14	13	92.9

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	54	41	75.9
¹³C chemical shifts	38	1	2.6

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	16	8	50.0
¹³C chemical shifts	16	0	0.0

Keywords ANTIMICROBIAL PROTEIN, Amphipathic helix, Antimicrobial peptides, Leucine-rich peptides, database designed peptides

Search

Query history

Resources

Search for primary databases

Search for subsidiary databases

Display

Hits per page

Statistics

Query Changes will take effect after "OK" button is selected.

Maximum hits

Default conjunction operator

Omni-box

Search filter

Sequence search (BLAST)

E-value

Query sequence coverage

Miscellaneous

The number of previewed publications

Completeness of assigned chemical shift

Sequence chart about top aligned regions

Sequence chart about interacting regions

Hit context with highlight

Link destinations for BMRB, PDB and EMDB

Found 1 Document (0.408 seconds)

BMRB: 30524

Sample

Experiments performed 5 experiments Detail

Instrument

Sample

Instrument

Sample

Instrument

Sample

Instrument

Sample

Instrument

Sample

Chemical shift validation 3 contents Detail