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BMRB: 31253

Solution structure of the major PDGFRB promoter G-quadruplex with a broken-strand G21 fill-in

Authors

Assembly

DNA (5'-D(*AP*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*G)-3')

Entity

1. DNA (5'-D(*AP*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*G)-3') (polymer, Thiol state: not present), 21 monomers, 6747.267 Da Detail

AAGGGAGGGC GGCGGGGCAG G

Formula weight

6747.267 Da

Source organism

Homo sapiens

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chemcal Shifts

¹H: 189, ¹³C: 132 assignments Detail

ID	Entity ID	Seq ID	Comp ID	Atom ID	Atom type	Val	Val err	Ambig. code
1	1	1	DA	H1'	H	6.135	0.001	1
2	1	1	DA	H2	H	7.831	0.0	1
3	1	1	DA	H2'	H	2.360	0.002	1
4	1	1	DA	H2''	H	2.438	0.003	1
5	1	1	DA	H3'	H	4.686	0.002	1
6	1	1	DA	H4'	H	4.041	0.002	1
7	1	1	DA	H5'	H	3.557	0.002	2
8	1	1	DA	H5''	H	3.557	0.002	2
9	1	1	DA	H8	H	8.001	0.001	1
10	1	1	DA	C1'	C	88.373		1
11	1	1	DA	C2	C	154.217		1
12	1	1	DA	C2'	C	40.819		1
13	1	1	DA	C3'	C	79.201		1
14	1	1	DA	C4'	C	89.847		1
15	1	1	DA	C5'	C	64.543		1
16	1	1	DA	C8	C	142.941		1
17	1	2	DA	H1'	H	5.917	0.002	1
18	1	2	DA	H2	H	7.845	0.001	1
19	1	2	DA	H2'	H	2.258	0.003	1
20	1	2	DA	H2''	H	2.598	0.001	1
21	1	2	DA	H3'	H	4.850	0.001	1
22	1	2	DA	H4'	H	4.144	0.002	1
23	1	2	DA	H5'	H	3.548	0.004	2
24	1	2	DA	H5''	H	3.871	0.002	2
25	1	2	DA	H8	H	7.917	0.001	1
26	1	2	DA	C1'	C	87.283		1
27	1	2	DA	C2	C	154.600		1
28	1	2	DA	C2'	C	42.394	0.001	1
29	1	2	DA	C4'	C	86.712		1
30	1	2	DA	C5'	C	68.104	0.006	1
31	1	2	DA	C8	C	141.038		1
32	1	3	DG	H1	H	11.855	0.001	1
33	1	3	DG	H1'	H	6.114	0.001	1
34	1	3	DG	H2'	H	2.809	0.002	1
35	1	3	DG	H2''	H	3.062	0.001	1
36	1	3	DG	H3'	H	5.004	0.002	1
37	1	3	DG	H4'	H	4.495	0.001	1
38	1	3	DG	H5'	H	4.025	0.002	2
39	1	3	DG	H5''	H	4.156	0.002	2
40	1	3	DG	H8	H	8.042	0.001	1
41	1	3	DG	C1'	C	84.431		1
42	1	3	DG	C2'	C	39.915		1
43	1	3	DG	C3'	C	79.779		1
44	1	3	DG	C4'	C	88.428		1
45	1	3	DG	C5'	C	69.747	0.006	1
46	1	3	DG	C8	C	137.928		1
47	1	4	DG	H1	H	11.287	0.002	1
48	1	4	DG	H1'	H	6.224	0.002	1
49	1	4	DG	H2'	H	2.732	0.002	1
50	1	4	DG	H2''	H	3.005	0.002	1
51	1	4	DG	H3'	H	5.081	0.001	1
52	1	4	DG	H4'	H	4.599	0.002	1
53	1	4	DG	H5'	H	4.322	0.001	2
54	1	4	DG	H5''	H	4.358	0.002	2
55	1	4	DG	H8	H	7.791	0.001	1
56	1	4	DG	C1'	C	84.413		1
57	1	4	DG	C2'	C	42.505	0.003	1
58	1	4	DG	C3'	C	79.310		1
59	1	4	DG	C4'	C	87.204		1
60	1	4	DG	C5'	C	68.763	0.003	1
61	1	4	DG	C8	C	137.253		1
62	1	5	DG	H1	H	11.115	0.001	1
63	1	5	DG	H1'	H	6.482	0.002	1
64	1	5	DG	H2'	H	2.644	0.001	1
65	1	5	DG	H2''	H	2.780	0.002	1
66	1	5	DG	H3'	H	5.178	0.001	1
67	1	5	DG	H4'	H	4.662	0.001	1
68	1	5	DG	H5'	H	4.370	0.002	2
69	1	5	DG	H5''	H	4.434	0.002	2
70	1	5	DG	H8	H	7.825	0.001	1
71	1	5	DG	C1'	C	85.039		1
72	1	5	DG	C2'	C	41.593		1
73	1	5	DG	C3'	C	81.008		1
74	1	5	DG	C4'	C	85.603		1
75	1	5	DG	C5'	C	68.986		1
76	1	5	DG	C8	C	137.498		1
77	1	6	DA	H1'	H	6.694	0.002	1
78	1	6	DA	H2	H	8.331	0.0	1
79	1	6	DA	H2'	H	2.935	0.002	1
80	1	6	DA	H2''	H	2.935	0.002	1
81	1	6	DA	H3'	H	5.240	0.002	1
82	1	6	DA	H4'	H	4.730	0.003	1
83	1	6	DA	H5'	H	4.334	0.002	1
84	1	6	DA	H5''	H	4.334	0.002	1
85	1	6	DA	H8	H	8.560	0.002	1
86	1	6	DA	C1'	C	86.505		1
87	1	6	DA	C2	C	155.466		1
88	1	6	DA	C2'	C	42.286		1
89	1	6	DA	C3'	C	79.322		1
90	1	6	DA	C4'	C	87.602		1
91	1	6	DA	C5'	C	68.068		1
92	1	6	DA	C8	C	142.460		1
93	1	7	DG	H1	H	11.501	0.001	1
94	1	7	DG	H1'	H	6.101	0.001	1
95	1	7	DG	H2'	H	2.465	0.003	1
96	1	7	DG	H2''	H	2.919	0.001	1
97	1	7	DG	H3'	H	5.135	0.001	1
98	1	7	DG	H4'	H	4.510	0.002	1
99	1	7	DG	H5'	H	4.324	0.005	2
100	1	7	DG	H5''	H	4.414	0.001	2
101	1	7	DG	H8	H	7.965	0.001	1
102	1	7	DG	C1'	C	87.210		1
103	1	7	DG	C2'	C	43.915		1
104	1	7	DG	C3'	C	78.852		1
105	1	7	DG	C4'	C	87.222		1
106	1	7	DG	C5'	C	67.958		1
107	1	7	DG	C8	C	137.283		1
108	1	8	DG	H1	H	11.427	0.001	1
109	1	8	DG	H1'	H	6.197	0.002	1
110	1	8	DG	H2'	H	2.656	0.002	1
111	1	8	DG	H2''	H	2.961	0.002	1
112	1	8	DG	H3'	H	5.089	0.001	1
113	1	8	DG	H4'	H	4.595	0.002	1
114	1	8	DG	H5'	H	4.297	0.002	2
115	1	8	DG	H5''	H	4.297	0.002	2
116	1	8	DG	H8	H	7.883	0.001	1
117	1	8	DG	C1'	C	84.467		1
118	1	8	DG	C2'	C	43.111		1
119	1	8	DG	C3'	C	79.480		1
120	1	8	DG	C4'	C	87.180		1
121	1	8	DG	C5'	C	68.426		1
122	1	8	DG	C8	C	138.071		1
123	1	9	DG	H1	H	10.463	0.002	1
124	1	9	DG	H1'	H	6.420	0.002	1
125	1	9	DG	H2'	H	2.777	0.002	1
126	1	9	DG	H2''	H	2.637	0.003	1
127	1	9	DG	H3'	H	5.136	0.001	1
128	1	9	DG	H4'	H	4.659	0.002	1
129	1	9	DG	H5'	H	4.327	0.002	2
130	1	9	DG	H5''	H	4.368	0.003	2
131	1	9	DG	H8	H	7.824	0.001	1
132	1	9	DG	C1'	C	84.850		1
133	1	9	DG	C2'	C	40.996		1
134	1	9	DG	C3'	C	81.297		1
135	1	9	DG	C4'	C	85.352		1
136	1	9	DG	C5'	C	69.231		1
137	1	9	DG	C8	C	137.479		1
138	1	10	DC	H1'	H	6.482	0.0	1
139	1	10	DC	H2'	H	2.450	0.002	1
140	1	10	DC	H2''	H	2.780	0.001	1
141	1	10	DC	H3'	H	5.082	0.001	1
142	1	10	DC	H4'	H	4.521	0.005	1
143	1	10	DC	H5	H	6.197	0.001	1
144	1	10	DC	H5'	H	4.309	0.001	2
145	1	10	DC	H5''	H	4.412	0.001	2
146	1	10	DC	H6	H	8.021	0.001	1
147	1	10	DC	C1'	C	88.468		1
148	1	10	DC	C2'	C	42.130		1
149	1	10	DC	C3'	C	77.600		1
150	1	10	DC	C4'	C	87.881		1
151	1	10	DC	C5	C	99.374		1
152	1	10	DC	C5'	C	67.393	0.004	1
153	1	10	DC	C6	C	144.056		1
154	1	11	DG	H1	H	11.669	0.001	1
155	1	11	DG	H1'	H	6.221	0.001	1
156	1	11	DG	H2'	H	2.953	0.002	1
157	1	11	DG	H2''	H	2.408	0.003	1
158	1	11	DG	H3'	H	5.181	0.001	1
159	1	11	DG	H4'	H	4.523	0.001	1
160	1	11	DG	H5'	H	4.220	0.002	2
161	1	11	DG	H5''	H	4.357	0.002	2
162	1	11	DG	H8	H	8.025	0.001	1
163	1	11	DG	C1'	C	86.593		1
164	1	11	DG	C2'	C	44.082		1
165	1	11	DG	C3'	C	81.008		1
166	1	11	DG	C4'	C	87.180		1
167	1	11	DG	C5'	C	68.697	0.003	1
168	1	11	DG	C8	C	137.918		1
169	1	12	DG	H1	H	11.222	0.001	1
170	1	12	DG	H1'	H	6.229	0.001	1
171	1	12	DG	H2'	H	2.646	0.002	1
172	1	12	DG	H2''	H	2.916	0.002	1
173	1	12	DG	H3'	H	5.174	0.002	1
174	1	12	DG	H4'	H	4.654	0.002	1
175	1	12	DG	H5'	H	4.218	0.004	2
176	1	12	DG	H5''	H	4.364	0.001	2
177	1	12	DG	H8	H	7.875	0.001	1
178	1	12	DG	C1'	C	84.213		1
179	1	12	DG	C2'	C	41.468		1
180	1	12	DG	C3'	C	79.430		1
181	1	12	DG	C4'	C	86.806		1
182	1	12	DG	C5'	C	69.245	0.003	1
183	1	12	DG	C8	C	137.662		1
184	1	13	DC	H1'	H	6.500	0.002	1
185	1	13	DC	H2'	H	2.384	0.003	1
186	1	13	DC	H2''	H	2.787	0.002	1
187	1	13	DC	H3'	H	5.118	0.001	1
188	1	13	DC	H4'	H	4.624	0.002	1
189	1	13	DC	H5	H	6.220	0.001	1
190	1	13	DC	H5'	H	4.375	0.001	2
191	1	13	DC	H5''	H	4.526	0.001	2
192	1	13	DC	H6	H	8.080	0.001	1
193	1	13	DC	C1'	C	89.225		1
194	1	13	DC	C2'	C	42.079		1
195	1	13	DC	C3'	C	79.828		1
196	1	13	DC	C4'	C	88.289		1
197	1	13	DC	C5	C	99.426		1
198	1	13	DC	C5'	C	68.704		1
199	1	13	DC	C6	C	144.230		1
200	1	14	DG	H1	H	11.355	0.001	1
201	1	14	DG	H1'	H	6.045	0.001	1
202	1	14	DG	H2'	H	2.590	0.003	1
203	1	14	DG	H2''	H	2.824	0.003	1
204	1	14	DG	H3'	H	4.888	0.002	1
205	1	14	DG	H4'	H	4.546	0.001	1
206	1	14	DG	H5'	H	4.410	0.0	2
207	1	14	DG	H5''	H	4.293	0.001	2
208	1	14	DG	H8	H	8.192	0.001	1
209	1	14	DG	C1'	C	88.391		1
210	1	14	DG	C2'	C	43.252		1
211	1	14	DG	C3'	C	77.539		1
212	1	14	DG	C4'	C	87.169		1
213	1	14	DG	C5'	C	68.925		1
214	1	14	DG	C8	C	138.245		1
215	1	15	DG	H1	H	11.396	0.001	1
216	1	15	DG	H1'	H	6.073	0.002	1
217	1	15	DG	H2'	H	2.671	0.001	1
218	1	15	DG	H2''	H	2.804	0.002	1
219	1	15	DG	H3'	H	5.071	0.001	1
220	1	15	DG	H4'	H	4.587	0.002	1
221	1	15	DG	H5'	H	4.231	0.002	2
222	1	15	DG	H5''	H	4.280	0.001	2
223	1	15	DG	H8	H	7.878	0.001	1
224	1	15	DG	C1'	C	84.776		1
225	1	15	DG	C2'	C	43.087	0.003	1
226	1	15	DG	C3'	C	80.803		1
227	1	15	DG	C4'	C	87.518		1
228	1	15	DG	C5'	C	68.920	0.003	1
229	1	15	DG	C8	C	137.856		1
230	1	16	DG	H1	H	11.324	0.001	1
231	1	16	DG	H1'	H	6.064	0.001	1
232	1	16	DG	H2'	H	2.481	0.002	1
233	1	16	DG	H2''	H	2.859	0.001	1
234	1	16	DG	H3'	H	5.024	0.001	1
235	1	16	DG	H4'	H	4.508	0.001	1
236	1	16	DG	H5'	H	4.340	0.003	2
237	1	16	DG	H5''	H	4.164	0.001	2
238	1	16	DG	H8	H	7.465	0.001	1
239	1	16	DG	C1'	C	84.486		1
240	1	16	DG	C2'	C	40.210	0.003	1
241	1	16	DG	C3'	C	80.201		1
242	1	16	DG	C4'	C	87.380		1
243	1	16	DG	C5'	C	69.368		1
244	1	16	DG	C8	C	136.727		1
245	1	17	DG	H1	H	12.853	0.002	1
246	1	17	DG	H1'	H	5.840	0.002	1
247	1	17	DG	H2'	H	2.535	0.003	1
248	1	17	DG	H2''	H	2.535	0.003	1
249	1	17	DG	H3'	H	4.957	0.001	1
250	1	17	DG	H4'	H	4.291	0.001	1
251	1	17	DG	H5'	H	4.201	0.002	2
252	1	17	DG	H5''	H	4.292	0.002	2
253	1	17	DG	H8	H	7.673	0.001	1
254	1	17	DG	H21	H	5.863	0.003	1
255	1	17	DG	C1'	C	83.559		1
256	1	17	DG	C2'	C	41.121		1
257	1	17	DG	C3'	C	76.672		1
258	1	17	DG	C4'	C	85.893		1
259	1	17	DG	C5'	C	66.886		1
260	1	17	DG	C8	C	137.870		1
261	1	18	DC	H1'	H	5.924	0.001	1
262	1	18	DC	H2'	H	1.615	0.003	1
263	1	18	DC	H2''	H	1.976	0.002	1
264	1	18	DC	H3'	H	4.414	0.002	1
265	1	18	DC	H4'	H	4.122	0.002	1
266	1	18	DC	H5	H	5.995	0.001	1
267	1	18	DC	H5'	H	3.957	0.004	2
268	1	18	DC	H5''	H	3.957	0.004	2
269	1	18	DC	H6	H	7.649	0.0	1
270	1	18	DC	C1'	C	87.991		1
271	1	18	DC	C2'	C	40.472		1
272	1	18	DC	C3'	C	78.035		1
273	1	18	DC	C4'	C	86.900		1
274	1	18	DC	C5	C	99.264		1
275	1	18	DC	C5'	C	67.352		1
276	1	18	DC	C6	C	143.678		1
277	1	19	DA	H1'	H	5.611	0.002	1
278	1	19	DA	H2	H	7.542	0.001	1
279	1	19	DA	H2'	H	1.786	0.003	1
280	1	19	DA	H2''	H	2.018	0.002	1
281	1	19	DA	H3'	H	4.470	0.001	1
282	1	19	DA	H4'	H	3.986	0.001	1
283	1	19	DA	H5'	H	3.407	0.002	2
284	1	19	DA	H5''	H	3.504	0.002	2
285	1	19	DA	H8	H	7.111	0.001	1
286	1	19	DA	C1'	C	85.975		1
287	1	19	DA	C2	C	154.476		1
288	1	19	DA	C2'	C	38.516		1
289	1	19	DA	C3'	C	79.346		1
290	1	19	DA	C4'	C	87.348		1
291	1	19	DA	C5'	C	67.579	0.006	1
292	1	19	DA	C8	C	140.815		1
293	1	20	DG	H1'	H	5.616	0.002	1
294	1	20	DG	H2'	H	1.211	0.001	1
295	1	20	DG	H2''	H	2.012	0.004	1
296	1	20	DG	H3'	H	4.544	0.002	1
297	1	20	DG	H4'	H	4.162	0.002	1
298	1	20	DG	H5'	H	3.793	0.002	2
299	1	20	DG	H5''	H	3.904	0.002	2
300	1	20	DG	H8	H	7.332	0.001	1
301	1	20	DG	C1'	C	84.159		1
302	1	20	DG	C2'	C	38.192		1
303	1	20	DG	C3'	C	77.723		1
304	1	20	DG	C4'	C	87.301		1
305	1	20	DG	C5'	C	67.737		1
306	1	20	DG	C8	C	137.052		1
307	1	21	DG	H1	H	11.152	0.001	1
308	1	21	DG	H1'	H	6.442	0.001	1
309	1	21	DG	H2'	H	2.587	0.002	1
310	1	21	DG	H2''	H	2.771	0.003	1
311	1	21	DG	H3'	H	4.584	0.001	1
312	1	21	DG	H4'	H	4.469	0.001	1
313	1	21	DG	H5'	H	4.210	0.002	2
314	1	21	DG	H5''	H	4.528	0.002	2
315	1	21	DG	H8	H	7.534	0.001	1
316	1	21	DG	C1'	C	89.746		1
317	1	21	DG	C2'	C	44.269	0.002	1
318	1	21	DG	C3'	C	73.336		1
319	1	21	DG	C4'	C	89.292		1
320	1	21	DG	C5'	C	66.627		1
321	1	21	DG	C8	C	136.777		1

Release date

2025-07-24

Citation

Structures and dynamics of the major G-quadruplex in the human PDGFR-β gene promoter: insights into vacancy G-quadruplex formation
Han, Y., Dickerhoff, J., Yang, D.
Nucleic Acids Res. (2026), 54, PubMed 42695283 , DOI 10.1093/nar/gkag843 , Abstract

Entries sharing articles BMRB: 1 entries Detail

BMRB: 31252 released on 2025-07-24
Title Solution structure of the major PDGFRB promoter G-quadruplex with a broken-strand G22 fill-in

Experiments performed 3 experiments Detail

#	Name	Isotope labeling	Concentration
1	DNA (5'-D(APAPGPGPGPAPGPGPGPCPGPGPCPGPGPGPGPCPAPGP*G)-3')	natural abundance	1.06 mM
2	potassium chloride	natural abundance	75 mM
3	potassium phosphate	natural abundance	25 mM

#	Name	Isotope labeling	Concentration
1	DNA (5'-D(APAPGPGPGPAPGPGPGPCPGPGPCPGPGPGPGPCPAPGP*G)-3')	natural abundance	1.06 mM
2	potassium chloride	natural abundance	75 mM
3	potassium phosphate	natural abundance	25 mM

#	Name	Isotope labeling	Concentration
1	DNA (5'-D(APAPGPGPGPAPGPGPGPCPGPGPCPGPGPGPGPCPAPGP*G)-3')	natural abundance	1.06 mM
2	potassium chloride	natural abundance	75 mM
3	potassium phosphate	natural abundance	25 mM

Chemical shift validation 3 contents Detail

Properties

Input source #1: Assigned chemical shifts - Assigned chemical shifts	bmr31253_3.str
Diamagnetism of the molecular assembly	True (excluding Oxygen atoms)
Whether the assembly has a disulfide bond	None
Whether the assembly has a other bond	None
Whether the assembly contains a cyclic polymer	None
Overall data processing status	Warning

Disulfide bonds

None

Other bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)

None

Non-standard residues

None

Content subtype: bmr31253_3.str

#	Content subtype	Saveframe	Status	# of rows	Experiment type	Sequence coverage (%)
1	Assigned chemical shifts	assigned_chemical_shifts_1	Warning	321		100.0 (chain: 1, length: 21)
1	Chemical shift references	chem_shift_reference_1	OK	2		No information

Assigned chemical shifts

Saveframe: assigned_chemical_shifts_1

Status: Warning
Sequence coverage of experimental data
- Entity_assembly_ID: 1, Chain length: 21, Sequence coverage: 100.0%
Total number of assignments
- ¹H chemical shifts: 189
- ¹³C chemical shifts: 132

Completeness of assignments

Entity_assemble_ID: 1

Excluded Atom_ID in statistics

Comp_index_ID	Comp_ID	Atom_ID	CS value (ppm)
1	DA	C1'	88.373
1	DA	C2	154.217
1	DA	C2'	40.819
1	DA	C3'	79.201
1	DA	C4'	89.847
1	DA	C5'	64.543
1	DA	C8	142.941
2	DA	C1'	87.283
2	DA	C2	154.6
2	DA	C2'	42.394
2	DA	C4'	86.712
2	DA	C5'	68.104
2	DA	C8	141.038
3	DG	C1'	84.431
3	DG	C2'	39.915
3	DG	C3'	79.779
3	DG	C4'	88.428
3	DG	C5'	69.747
3	DG	C8	137.928
4	DG	C1'	84.413
4	DG	C2'	42.505
4	DG	C3'	79.31
4	DG	C4'	87.204
4	DG	C5'	68.763
4	DG	C8	137.253
5	DG	C1'	85.039
5	DG	C2'	41.593
5	DG	C3'	81.008
5	DG	C4'	85.603
5	DG	C5'	68.986
5	DG	C8	137.498
6	DA	C1'	86.505
6	DA	C2	155.466
6	DA	C2'	42.286
6	DA	C3'	79.322
6	DA	C4'	87.602
6	DA	C5'	68.068
6	DA	C8	142.46
7	DG	C1'	87.21
7	DG	C2'	43.915
7	DG	C3'	78.852
7	DG	C4'	87.222
7	DG	C5'	67.958
7	DG	C8	137.283
8	DG	C1'	84.467
8	DG	C2'	43.111
8	DG	C3'	79.48
8	DG	C4'	87.18
8	DG	C5'	68.426
8	DG	C8	138.071
9	DG	C1'	84.85
9	DG	C2'	40.996
9	DG	C3'	81.297
9	DG	C4'	85.352
9	DG	C5'	69.231
9	DG	C8	137.479
10	DC	H5''	4.412
10	DC	C1'	88.468
10	DC	C2'	42.13
10	DC	C3'	77.6
10	DC	C4'	87.881
10	DC	C5	99.374
10	DC	C5'	67.393
10	DC	C6	144.056
11	DG	C1'	86.593
11	DG	C2'	44.082
11	DG	C3'	81.008
11	DG	C4'	87.18
11	DG	C5'	68.697
11	DG	C8	137.918
12	DG	C1'	84.213
12	DG	C2'	41.468
12	DG	C3'	79.43
12	DG	C4'	86.806
12	DG	C5'	69.245
12	DG	C8	137.662
13	DC	H5''	4.526
13	DC	C1'	89.225
13	DC	C2'	42.079
13	DC	C3'	79.828
13	DC	C4'	88.289
13	DC	C5	99.426
13	DC	C5'	68.704
13	DC	C6	144.23
14	DG	C1'	88.391
14	DG	C2'	43.252
14	DG	C3'	77.539
14	DG	C4'	87.169
14	DG	C5'	68.925
14	DG	C8	138.245
15	DG	C1'	84.776
15	DG	C2'	43.087
15	DG	C3'	80.803
15	DG	C4'	87.518
15	DG	C5'	68.92
15	DG	C8	137.856
16	DG	C1'	84.486
16	DG	C2'	40.21
16	DG	C3'	80.201
16	DG	C4'	87.38
16	DG	C5'	69.368
16	DG	C8	136.727
17	DG	H21	5.863
17	DG	C1'	83.559
17	DG	C2'	41.121
17	DG	C3'	76.672
17	DG	C4'	85.893
17	DG	C5'	66.886
17	DG	C8	137.87
18	DC	H5''	3.957
18	DC	C1'	87.991
18	DC	C2'	40.472
18	DC	C3'	78.035
18	DC	C4'	86.9
18	DC	C5	99.264
18	DC	C5'	67.352
18	DC	C6	143.678
19	DA	C1'	85.975
19	DA	C2	154.476
19	DA	C2'	38.516
19	DA	C3'	79.346
19	DA	C4'	87.348
19	DA	C5'	67.579
19	DA	C8	140.815
20	DG	C1'	84.159
20	DG	C2'	38.192
20	DG	C3'	77.723
20	DG	C4'	87.301
20	DG	C5'	67.737
20	DG	C8	137.052
21	DG	C1'	89.746
21	DG	C2'	44.269
21	DG	C3'	73.336
21	DG	C4'	89.292
21	DG	C5'	66.627
21	DG	C8	136.777

All atoms

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	192	185	96.4

Backbone atoms

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	144	144	100.0

Side chain atoms

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	48	41	85.4

Methyl group atoms

Atom group	# of target shifts	# of assigned shifts	Completeness (%)

Aromatic group atoms

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	22	22	100.0

Histogram of normalized assigned chemical shifts

Keywords DNA, G-quadruplex DNA, PDGFRB

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BMRB: 31253

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Chemical shift validation 3 contents Detail