Structure of TRBP dsRBD 1 and 2 in complex with a 19 bp siRNA (Complex B)
GGSLPSIEQM LAANPGKTPI SLLQEYGTRI GKTPVYDLLK AEGQAHQPNF TFRVTVGDTS CTGQGPSKKA AKHKAAEVAL KHLKGGSMLE PALEDSSSFS PLDSSLPEDI PVFTAAAAAT PVPSVVLTRS PPMELQPPVS PQQSECNPVG ALQELVVQKG WRLPEYTVTQ ESGPAHRKEF TMTCRVERFI EIGSGTSKKL AKRNAAAKML LRVHT
Polymer type: polypeptide(L) polyribonucleotide
Total | 1H | 13C | 15N | |
---|---|---|---|---|
All | 52.5 % (1627 of 3102) | 56.7 % (925 of 1630) | 44.0 % (545 of 1238) | 67.1 % (157 of 234) |
Backbone | 46.4 % (794 of 1712) | 47.8 % (324 of 678) | 37.9 % (318 of 839) | 77.9 % (152 of 195) |
Sidechain | 61.3 % (974 of 1589) | 63.1 % (601 of 952) | 61.5 % (368 of 598) | 12.8 % (5 of 39) |
Aromatic | 27.2 % (87 of 320) | 33.1 % (53 of 160) | 24.3 % (33 of 136) | 4.2 % (1 of 24) |
Methyl | 73.9 % (176 of 238) | 73.9 % (88 of 119) | 73.9 % (88 of 119) |
1. entity 1
GGSLPSIEQM LAANPGKTPI SLLQEYGTRI GKTPVYDLLK AEGQAHQPNF TFRVTVGDTS CTGQGPSKKA AKHKAAEVAL KHLKGGSMLE PALEDSSSFS PLDSSLPEDI PVFTAAAAAT PVPSVVLTRS PPMELQPPVS PQQSECNPVG ALQELVVQKG WRLPEYTVTQ ESGPAHRKEF TMTCRVERFI EIGSGTSKKL AKRNAAAKML LRVHT2. entity 2
UUAAUUAUCU AUUCCGUACU U3. entity 3
GUACGGAAUA GAUAAUUAAU USolvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 313 K, pH 6.5, Details 1 mM [U-100% 13C; U-100% 15N] dsRBD1, 1 mM EL86, 90% H2O/10% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | dsRBD1 | [U-100% 13C; U-100% 15N] | 1 mM | |
2 | EL86 | natural abundance | 1 mM |
Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 313 K, pH 6.5, Details 1 mM [U-100% 13C; U-100% 15N] dsRBD2, 1 mM EL86, 90% H2O/10% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
3 | EL86 | natural abundance | 1 mM | |
4 | dsRBD2 | [U-100% 13C; U-100% 15N] | 1 mM |
Solvent system 100% D2O, Pressure 1 atm, Temperature 313 K, pH 6.5, Details 1 mM [U-100% 13C; U-100% 15N; U-80% 2H] dsRBD12, 1 mM EL86, 100% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
5 | EL86 | natural abundance | 1 mM | |
6 | dsRBD12 | [U-100% 13C; U-100% 15N; U-80% 2H] | 1 mM |
Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 313 K, pH 6.5, Details 1 mM [U-100% 13C; U-100% 15N; U-80% 2H] dsRBD12, 1 mM EL86, 90% H2O/10% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
7 | EL86 | natural abundance | 1 mM | |
8 | dsRBD12 | [U-100% 13C; U-100% 15N; U-80% 2H] | 1 mM |
Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 313 K, pH 6.5, Details 1 mM [U-100% 13C; U-100% 15N; U-80% 2H] dsRBD12, 1 mM EL86, 90% H2O/10% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
9 | EL86 | natural abundance | 1 mM | |
10 | dsRBD12 | [U-100% 13C; U-100% 15N; U-80% 2H] | 1 mM |