BMRB: 34186

Quadruplex with flipped tetrad formed by the c-myc promoter sequence

Authors

Karg, B., Weisz, K.

Assembly

cmbr-481317

Entity

1. cmbr-481317 (polymer), 22 monomers, 7387.064 Da Detail

TGAXGGTXGG TAXGGTXGGT AA

Formula weight

7387.064 Da

Source organism

Homo sapiens

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chemcal Shifts

¹H: 158 assignments Detail

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ID	Entity ID	Seq ID	Comp ID	Atom ID	Atom type	Val	Val err	Ambig. code
1	1	1	DT	H1'	H	5.850	0.004	1
2	1	1	DT	H2'	H	1.785	0.005	2
3	1	1	DT	H2''	H	2.121	0.002	2
4	1	1	DT	H3'	H	4.452	0.004	1
5	1	1	DT	H5'	H	3.521	0.008	2
6	1	1	DT	H5''	H	3.855	0.003	2
7	1	1	DT	H6	H	7.285	0.005	1
8	1	1	DT	H71	H	1.674	0.005	1
9	1	1	DT	H72	H	1.674	0.005	1
10	1	1	DT	H73	H	1.674	0.005	1
11	1	2	DG	H1'	H	5.847	0.003	1
12	1	2	DG	H2'	H	2.537	0.004	1
13	1	2	DG	H2''	H	2.436	0.002	1
14	1	2	DG	H3'	H	4.694	0.016	1
15	1	2	DG	H4'	H	4.138	0.003	1
16	1	2	DG	H5'	H	3.884	0.009	2
17	1	2	DG	H5''	H	3.966	0.003	2
18	1	2	DG	H8	H	7.628	0.006	1
19	1	3	DA	H1'	H	6.047	0.003	1
20	1	3	DA	H2	H	7.552	0.0	1
21	1	3	DA	H2'	H	1.963	0.005	1
22	1	3	DA	H2''	H	2.529	0.004	1
23	1	3	DA	H3'	H	4.678		1
24	1	3	DA	H5'	H	4.049		1
25	1	3	DA	H5''	H	3.669		1
26	1	3	DA	H8	H	7.850	0.002	1
27	1	4	BGM	H1	H	11.326	0.002	1
28	1	4	BGM	H1'	H	6.196	0.003	1
29	1	4	BGM	H2'	H	3.970	0.006	1
30	1	4	BGM	H2''	H	3.052	0.002	1
31	1	4	BGM	H3'	H	4.920	0.006	1
32	1	5	DG	H1	H	11.511	0.001	1
33	1	5	DG	H1'	H	5.968	0.005	1
34	1	5	DG	H2'	H	2.444	0.005	1
35	1	5	DG	H2''	H	2.898	0.002	1
36	1	5	DG	H3'	H	4.996	0.003	1
37	1	5	DG	H8	H	8.010	0.004	1
38	1	6	DG	H1	H	10.712	0.004	1
39	1	6	DG	H1'	H	6.420	0.013	1
40	1	6	DG	H2'	H	2.661	0.002	1
41	1	6	DG	H2''	H	2.612		1
42	1	6	DG	H3'	H	5.118	0.006	1
43	1	6	DG	H4'	H	4.484	0.007	1
44	1	6	DG	H8	H	7.636	0.003	1
45	1	7	DT	H1'	H	6.497	0.007	1
46	1	7	DT	H2'	H	2.387	0.011	1
47	1	7	DT	H2''	H	2.768	0.006	1
48	1	7	DT	H3'	H	5.089	0.01	1
49	1	7	DT	H4'	H	4.343	0.005	1
50	1	7	DT	H6	H	7.880	0.003	1
51	1	7	DT	H71	H	1.982	0.004	1
52	1	7	DT	H72	H	1.982	0.004	1
53	1	7	DT	H73	H	1.982	0.004	1
54	1	8	BGM	H1	H	11.398	0.002	1
55	1	8	BGM	H1'	H	5.971	0.007	1
56	1	8	BGM	H2'	H	3.659		1
57	1	8	BGM	H2''	H	2.944	0.01	1
58	1	8	BGM	H3'	H	5.049	0.004	1
59	1	8	BGM	H4'	H	5.046	0.001	1
60	1	9	DG	H1	H	11.879	0.001	1
61	1	9	DG	H1'	H	5.847	0.003	1
62	1	9	DG	H2'	H	2.599	0.004	1
63	1	9	DG	H2''	H	2.780	0.003	1
64	1	9	DG	H3'	H	5.048	0.005	1
65	1	9	DG	H8	H	8.226	0.002	1
66	1	10	DG	H1	H	11.483	0.0	1
67	1	10	DG	H1'	H	6.427	0.009	1
68	1	10	DG	H2'	H	2.662	0.005	1
69	1	10	DG	H2''	H	2.598	0.002	1
70	1	10	DG	H3'	H	5.079	0.003	1
71	1	10	DG	H8	H	7.831	0.003	1
72	1	11	DT	H1'	H	6.211	0.003	1
73	1	11	DT	H2'	H	2.450	0.003	1
74	1	11	DT	H3'	H	5.090		1
75	1	11	DT	H5'	H	4.202	0.016	2
76	1	11	DT	H5''	H	3.965		2
77	1	11	DT	H6	H	7.632	0.001	1
78	1	11	DT	H71	H	1.936		1
79	1	11	DT	H72	H	1.936		1
80	1	11	DT	H73	H	1.936		1
81	1	12	DA	H1'	H	6.649	0.004	1
82	1	12	DA	H2	H	8.306	0.002	1
83	1	12	DA	H2'	H	3.069	0.005	1
84	1	12	DA	H2''	H	2.951	0.001	1
85	1	12	DA	H3'	H	5.246	0.004	1
86	1	12	DA	H4'	H	4.617		1
87	1	12	DA	H5''	H	4.177		1
88	1	12	DA	H8	H	8.498	0.002	1
89	1	13	BGM	H1	H	11.167	0.011	1
90	1	13	BGM	H1'	H	6.162	0.002	1
91	1	13	BGM	H2'	H	3.555	0.003	1
92	1	13	BGM	H2''	H	3.090	0.003	1
93	1	13	BGM	H3'	H	5.051	0.003	1
94	1	14	DG	H1	H	11.456	0.001	1
95	1	14	DG	H1'	H	5.980	0.005	1
96	1	14	DG	H2'	H	2.473	0.001	1
97	1	14	DG	H2''	H	2.921	0.002	1
98	1	14	DG	H3'	H	5.005	0.004	1
99	1	14	DG	H8	H	7.961	0.004	1
100	1	15	DG	H1	H	10.868	0.007	1
101	1	15	DG	H1'	H	6.476	0.003	1
102	1	15	DG	H2'	H	2.675	0.003	1
103	1	15	DG	H3'	H	5.132	0.005	1
104	1	15	DG	H4'	H	4.339	0.017	1
105	1	15	DG	H8	H	7.707	0.003	1
106	1	16	DT	H1'	H	6.497	0.007	1
107	1	16	DT	H2'	H	2.387	0.011	1
108	1	16	DT	H2''	H	2.771	0.003	1
109	1	16	DT	H3'	H	5.104	0.01	1
110	1	16	DT	H4'	H	4.347	0.001	1
111	1	16	DT	H6	H	7.880	0.003	1
112	1	16	DT	H71	H	1.982	0.004	1
113	1	16	DT	H72	H	1.982	0.004	1
114	1	16	DT	H73	H	1.982	0.004	1
115	1	17	BGM	H1	H	11.056	0.007	1
116	1	17	BGM	H1'	H	5.951	0.002	1
117	1	17	BGM	H2'	H	2.733	0.003	1
118	1	17	BGM	H2''	H	2.823	0.006	1
119	1	17	BGM	H3'	H	5.050	0.002	1
120	1	17	BGM	H4'	H	5.045		1
121	1	18	DG	H1	H	11.895	0.002	1
122	1	18	DG	H1'	H	5.741	0.003	1
123	1	18	DG	H2'	H	2.652	0.016	1
124	1	18	DG	H2''	H	2.617	0.006	1
125	1	18	DG	H3'	H	5.047	0.003	1
126	1	18	DG	H8	H	8.256	0.002	1
127	1	19	DG	H1	H	11.190	0.007	1
128	1	19	DG	H1'	H	6.192	0.002	1
129	1	19	DG	H2'	H	2.482	0.003	1
130	1	19	DG	H2''	H	2.757	0.007	1
131	1	19	DG	H3'	H	4.927	0.004	1
132	1	19	DG	H8	H	7.600	0.002	1
133	1	20	DT	H1'	H	5.845	0.005	1
134	1	20	DT	H2'	H	1.803	0.003	1
135	1	20	DT	H2''	H	2.246	0.002	1
136	1	20	DT	H3'	H	4.722	0.004	1
137	1	20	DT	H5'	H	4.149	0.006	2
138	1	20	DT	H5''	H	4.049	0.005	2
139	1	20	DT	H6	H	7.169	0.002	1
140	1	20	DT	H71	H	1.597	0.002	1
141	1	20	DT	H72	H	1.597	0.002	1
142	1	20	DT	H73	H	1.597	0.002	1
143	1	21	DA	H1'	H	5.796	0.007	1
144	1	21	DA	H2	H	7.366	0.003	1
145	1	21	DA	H2'	H	2.123	0.003	1
146	1	21	DA	H2''	H	2.339	0.003	1
147	1	21	DA	H3'	H	4.611		1
148	1	21	DA	H5'	H	3.875	0.014	2
149	1	21	DA	H5''	H	3.757	0.004	2
150	1	21	DA	H8	H	7.851	0.01	1
151	1	22	DA	H1'	H	5.794	0.013	1
152	1	22	DA	H2	H	7.492	0.007	1
153	1	22	DA	H2'	H	2.298	0.003	1
154	1	22	DA	H2''	H	2.296	0.003	1
155	1	22	DA	H3'	H	4.386	0.002	1
156	1	22	DA	H5'	H	3.763	0.006	2
157	1	22	DA	H5''	H	3.618	0.002	2
158	1	22	DA	H8	H	7.680	0.01	1

Release date

2018-06-05

Citation

Loop Length Affects Syn-Anti Conformational Rearrangements in Parallel G-Quadruplexes
Karg, B., Weisz, K.
Chemistry (2018), 24, 10246-10252, PubMed 29756658 , DOI 10.1002/chem.201801851 , Abstract

Experiments performed 3 experiments Detail