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Solution Structure of CaM/Kv7.2-hAB Complex
Authors
Bernardo-Seisdedos, G., Villarroel, A., Millet, O.
Assembly
CaM/Kv7.2-hAB Complex
Entity
1. CaM/Kv7.2-hAB Complex, entity 1 (polymer, Thiol state: all free), 115 monomers, 13575.34 Da Detail

MSYYHHHHHH DYDIPTTENL YFQGAMGILG SGQKHFEKRR NPAAGLIQSA WRFYATNLSR TDLHSTWQYY ERTVTVPMYR GLEDLTPGLK VSIRAVCVMR FLVSKRKFKE SLRLD


2. CaM/Kv7.2-hAB Complex, entity 2 (polymer, Thiol state: not present), 149 monomers, 16837.41 Da Detail

MADQLTEEQI AEFKEAFSLF DKDGDGTITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL TMMARKMKDT DSEEEIREAF RVFDKDGNGY ISAAELRHVM TNLGEKLTDE EVDEMIREAD IDGDGQVNYE EFVQMMTAK


3. CaM/Kv7.2-hAB Complex, entity CA (non-polymer), 40.078 × 4 Da
Total weight
30573.062 Da
Max. entity weight
16837.41 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 97.0 %, Completeness: 85.5 %, Completeness (bb): 94.5 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All85.5 % (2630 of 3077)86.5 % (1383 of 1599)83.7 % (1004 of 1199)87.1 % (243 of 279)
Backbone94.5 % (1486 of 1572)94.3 % (509 of 540)95.1 % (736 of 774)93.4 % (241 of 258)
Sidechain78.7 % (1378 of 1751)82.5 % (874 of 1059)74.8 % (502 of 671) 9.5 % (2 of 21)
Aromatic36.3 % (98 of 270)68.9 % (93 of 135) 3.8 % (5 of 133) 0.0 % (0 of 2)
Methyl89.8 % (228 of 254)91.3 % (116 of 127)88.2 % (112 of 127)

1. entity 1

MSYYHHHHHH DYDIPTTENL YFQGAMGILG SGQKHFEKRR NPAAGLIQSA WRFYATNLSR TDLHSTWQYY ERTVTVPMYR GLEDLTPGLK VSIRAVCVMR FLVSKRKFKE SLRLD

2. entity 2

MADQLTEEQI AEFKEAFSLF DKDGDGTITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL TMMARKMKDT DSEEEIREAF RVFDKDGNGY ISAAELRHVM TNLGEKLTDE EVDEMIREAD IDGDGQVNYE EFVQMMTAK

Sample #1

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 303 K, pH 6, Details 1 mM [U-100% 13C; U-100% 15N; U-50% 2H] Kv7.2-hAB, 1 mM [U-100% 13C; U-100% 15N; U-50% 2H] Calmodulin, 120 mM potassium chloride, 20 mM MES, 5 mM CaCl2, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O


#NameIsotope labelingTypeConcentration
1Kv7.2-hAB[U-100% 13C; U-100% 15N; U-50% 2H]1 mM
2Calmodulin[U-100% 13C; U-100% 15N; U-50% 2H]1 mM
3potassium chloridenatural abundance120 mM
4MESnatural abundance20 mM
5CaCl2natural abundance5 mM
6sodium azidenatural abundance2 uM
7DSS[U-2H]200 uM
Sample #2

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 303 K, pH 6, Details 500 uM [U-100% 13C; U-100% 15N] Kv7.2-hAB, 500 uM Calmodulin, 120 mM potassium chloride, 20 mM MES, 5 mM CaCl2, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O


#NameIsotope labelingTypeConcentration
8Kv7.2-hAB[U-100% 13C; U-100% 15N]500 uM
9Calmodulinnatural abundance500 uM
10potassium chloridenatural abundance120 mM
11MESnatural abundance20 mM
12CaCl2natural abundance5 mM
13sodium azidenatural abundance2 uM
14DSS[U-2H]200 uM
Sample #3

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 303 K, pH 6, Details 250 uM [U-100% 15N] Kv7.2-hAB, 250 uM [U-100% 15N] Calmodulin, 120 mM potassium chloride, 20 mM MES, 5 mM CaCl2, 2 uM sodium azide, 200 uM [U-2H] DSS, 95% H2O/5% D2O


#NameIsotope labelingTypeConcentration
15Kv7.2-hAB[U-100% 15N]250 uM
16Calmodulin[U-100% 15N]250 uM
17potassium chloridenatural abundance120 mM
18MESnatural abundance20 mM
19CaCl2natural abundance5 mM
20sodium azidenatural abundance2 uM
21DSS[U-2H]200 uM

LACS Plot; CA
Referencing offset: -0.06 ppm, Outliers: 2 Detail
LACS Plot; CB
Referencing offset: -0.06 ppm, Outliers: 2 Detail
LACS Plot; HA
Referencing offset: 0.04 ppm, Outliers: 4 Detail
LACS Plot; CO
Referencing offset: -0.32 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 10 models in PDB: 6FEH, Strand ID: A, B Detail


Release date
2018-02-14
Citation
Structural basis and energy landscape for the Ca2+ gating and calmodulation of the Kv7.2 K+ channel
Bernardo-Seisdedos, G., Nunez-Viadero, E., Gomis-Perez, C., Malo, C., Villarroel, A., Millet, O.
Proc. Natl. Acad. Sci. U. S. A. (2018), 115, 2395-2400, PubMed 29463698 , DOI 10.1073/pnas.1800235115 ,
Related entities 1. CaM/Kv7.2-hAB Complex, entity 1, : 1 : 1 : 5 entities Detail
Related entities 2. CaM/Kv7.2-hAB Complex, entity 2, : 10 : 1 : 88 entities Detail
Experiments performed 30 experiments Detail
NMR combined restraints 5 contents Detail
Keywords Calcium-signalling, Calmodulin, Complex, Transport, Voltage-gated potassium channel, metal transport