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Winter flounder 1a-1 in SDS micelles
Authors
Clarke, M., Mason, A.J.
Assembly
Pleurocidin-like prepropolypeptide
Entity
1. Pleurocidin-like prepropolypeptide (polymer, Thiol state: not present), 26 monomers, 2955.559 Da Detail

GRRKRKWLRR IGKGVKIIGG AALDHL


Formula weight
2955.559 Da
Source organism
Pseudopleuronectes americanus
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts, spectral_peak_list
Chem. Shift Complete
Sequence coverage: 96.2 %, Completeness: 76.9 %, Completeness (bb): 91.2 % Detail

Polymer type: polypeptide(L)

Total1H
All76.9 % (133 of 173)76.9 % (133 of 173)
Backbone91.2 % (52 of 57)91.2 % (52 of 57)
Sidechain69.8 % (81 of 116)69.8 % (81 of 116)
Aromatic 0.0 % (0 of 8) 0.0 % (0 of 8)
Methyl75.0 % (12 of 16)75.0 % (12 of 16)

1. entity 1

GRRKRKWLRR IGKGVKIIGG AALDHL

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 7.0, Details 0.5 mM NA WF 1a-1, 50 mM U-98% 2H deuterated sodium dodecyl sulphate (d-25) SDS, 0.05 w/w NA TSP, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1WF 1a-1natural abundance0.5 mM
2SDSU-98% SDS d2550 mM
3TSPnatural abundance0.05 w/w

Protein Blocks Logo
Calculated from 100 models in PDB: 6RY9, Strand ID: A Detail


Release date
2019-10-23
Citation
Winter flounder 1a-1 in SDS micelles
Clarke, M., Mason, A.J.
Related entities 1. Pleurocidin-like prepropolypeptide, : 1 : 2 entities Detail
Experiments performed 2 experiments Detail
Chemical shift validation 3 contents Detail
Keywords AMP, ANTIMICROBIAL PROTEIN, Antimicrobial peptide, Winter Flounder